Santa Fe Institute Collaboration Platform

COMPLEX TIME: Adaptation, Aging, & Arrow of Time

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Contact: Caitlin Lorraine McShea, Program Manager, cmcshea@santafe.edu

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A
A Major Role of the Macrophage in Quantitative Genetic Regulation of Immunoresponsiveness and Antiinfectious Immunity  +
A Neural Network Model of Retrieval-Induced Forgetting  +
A Period2 Phosphoswitch Regulates and Temperature Compensates Circadian Period  +
A Simpler Model of the Human Circadian Pacemaker  +
A Tissue Engineered Model of Aging: Interdependence and Cooperative Effects in Failing Tissues  +
A communal catalogue reveals Earth's multiscale microbial diversity  +
A high-bias low-variance introduction to machine learning for physicists  +
A model comparison approach shows stronger support for economic models of fertility decline  +
A quantitative model for the effects of light on the amplitude and phase of the deep circadian pacemaker based on human data  +
A robust measure of food web intervality  +
A theory of age-dependent mutation and senescence  +
A truer measure of our ignorance  +
A two process model of sleep regulation  +
Abnormal Locus Coeruleus Sleep Activity Alters Sleep Signatures of Memory Consolidation and Impairs Place Cell Stability and Spatial Memory  +
Adaptive foraging allows the maintenance of biodiversity of pollination networks  +
Addition of a non-photic component to a light-based mathematical model of the human circadian pacemaker  +
Age-structured and stage-structured population dynamics  +
Ageing and the circadian and homeostatic regulation of human sleep during forced desynchrony of rest, melatonin and temperature rhythms  +
Aging and measures of processing speed  +
Aging in complex interdependency networks  +
Aging, Rejuvenation, and Epigenetic Reprogramming: Resetting the Aging Clock  +
Aging, mortality, and the fast growth trade-off of Schizosaccharomyces pombe  +
S
A
Altered avalanche dynamics in a developmental NMDAR hypofunction model of cognitive impairment  +
Amplification or suppression: Social networks and the climate change-migration association in rural Mexico  +
An Optimization-Based Approach to Understanding Sensory Systems  +
An opposite role for tau in circadian rhythms revealed by mathematical modeling  +
Antidepressant suppression of non-REM sleep spindles and REM sleep impairs hippocampus-dependent learning while augmenting striatum-dependent learning  +
Are Individual Differences in Sleep and Circadian Timing Amplified by Use of Artificial Light Sources?  +
Are There too Many Farms in the World? Labor-Market Transaction Costs, Machine Capacities and Optimal Farm Size  +
Asking the Right Questions in Alzheimer’s Research  +
Available energy fluxes drive a transition in the diversity, stability, and functional structure of microbial communities  +
B
Brain disorders? Not really: Why network structures block reductionism in psychopathology research  +
Brain state stability during working memory is explained by network control theory, modulated by dopamine D1/D2 receptor function, and diminished in schizophrenia  +
C
CD4 memory T cell levels predict life span in genetically heterogeneous mice.  +
Cholinergic modulation of cognitive processing: Insights drawn from computational models  +
Choosing Prediction Over Explanation in Psychology: Lessons From Machine Learning  +
Circadian pacemaker interferes with sleep onset at specific times each day: Role in insomnia  +
Circadian phenotype impacts the brain's resting-state functional connectivity, attentional performance, and sleepiness  +
Circadian regulation dominates homeostatic control of sleep length and prior wake length in humans  +
Circadian temperature and melatonin rhythms, sleep, and neurobehavioral function in humans living on a 20-h day  +
Climate shocks and rural-urban migration in Mexico: exploring nonlinearities and thresholds  +
Climate shocks and the timing of migration from Mexico  +
Cognitive neuroscience of sleep  +
Coherence potentials: Loss-less, all-or-none network events in the cortex  +
Communication dynamics in complex brain networks  +
Community of the Self  +
Comparing the Morningness-Eveningness Questionnaire and Munich ChronoType Questionnaire to the dim light melatonin onset  +
R
Context-dependent computation by recurrent dynamics in prefrontal cortex  +
C
Control of Mammalian Circadian Rhythm by CKI -Regulated Proteasome-Mediated PER2 Degradation  +
Coordinated reset vibrotactile stimulation shows prolonged improvement in Parkinson's disease  +
Correlation between genetic regulation of immune responsiveness and host defence against infections and tumours  +
Correlation between interaction strengths drives stability in large ecological networks  +
Cortically coordinated NREM thalamocortical oscillations play an essential, instructive role in visual system plasticity  +
Critical dynamics of gene networks is a mechanism behind ageing and Gompertz law  +
Critical networks exhibit maximal information diversity in structure-dynamics relationships  +
Critical slowing down as early warning for the onset and termination of depression  +
Critical slowing down as early warning for the onset and termination of depression  +
Critical slowing down as early warning for the onset and termination of depression  +
Critical slowing down as early warning for the onset and termination of depression  +
D
Data analysis using regression and multilevel/hierarchical models  +
Decline of long-range temporal correlations in the human brain during sustained wakefulness  +
Decreased segregation of brain systems across the healthy adult lifespan  +
Demography of dietary restriction and death in Drosophila  +
Differential and enhanced response to climate forcing in diarrheal disease due to rotavirus across a megacity of the developing world  +
Diversity of ageing across the tree of life  +
Diversity, Stability, and Reproducibility in Stochastically Assembled Microbial Ecosystems  +
Domestic and International Climate Migration from Rural Mexico  +
Dynamical Resilience Indicators in Time Series of Self-Rated Health Correspond to Frailty Levels in Older Adults  +
Dynamical indicators of resilience in postural balance time series are related to successful aging in high-functioning older adults  +
E
Early-warning signals for critical transitions  +
Eco-Evolutionary Theory and Insect Outbreaks  +
Ecosystem tipping points in an evolving world  +
C
Editorial overview: Neurobiology of cognitive behavior: Complexity of neural computation and cognition  +
E
Editorial overview: Neurobiology of cognitive behavior: Complexity of neural computation and cognition  +
Effects of Thermoregulation on Human Sleep Patterns: A Mathematical Model of Sleep–Wake Cycles with REM–NREM Subcircuit  +
Effects of meditation experience on functional connectivity of distributed brain networks  +
Elevated success of multispecies bacterial invasions impacts community composition during ecological succession  +
Emancipatory catastrophism: What does it mean to climate change and risk society?  +
Emergence of complex dynamics in a simple model of signaling networks  +
Emergent Functional Network Effects in Parkinson Disease  +
Emergent simplicity in microbial community assembly  +
Entrainment of the human circadian clock to the natural light-dark cycle  +
Environmental Dimensions of Migration  +
Evidence of strain structure in Plasmodium falciparum var gene repertoires in children from Gabon, West Africa  +
Evolution and climate variability  +
Experience-dependent phase-reversal of hippocampal neuron firing during REM sleep  +
Exposure to room light before bedtime suppresses melatonin onset and shortens melatonin duration in humans  +
Extended Twilight among Isogenic C. elegans Causes a Disproportionate Scaling between Lifespan and Health  +
F
Fisher's geometrical model and the mutational patterns of antibiotic resistance across dose gradients  +
Fisher's geometrical model emerges as a property of complex integrated phenotypic networks  +
Five Years of Experimental Warming Increases the Biodiversity and Productivity of Phytoplankton  +
Fractal dynamics in physiology: Alterations with disease and aging  +
Frequency-dependent selection in vaccine-associated pneumococcal population dynamics  +
Functional Brain Networks Are Dominated by Stable Group and Individual Factors, Not Cognitive or Daily Variation  +
G
Genetic control of immune responsiveness, aging and tumor incidence  +
Genetic regulation of the specific and non-specific component of immunity  +
H
Health beliefs and the politics of Cree well-being  +
Heuristic segmentation of a nonstationary time series  +
Hierarchy theory: the challenge of complex systems  +