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From Thermodynamics of Computation
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List of results
- Mechanisms for the inheritance of chromatin states + (Danesh Moazed)
- Role of Astrocytes in Matching Blood Flow to Neuronal Activity + (Danica Jakovcevic)
- Stoichiometric network theory for nonequilibrium biochemical systems + (Hong Qian)
- Thermodynamic constraints for biochemical networks + (Daniel A. Beard)
- Thermodynamics of stoichiometric biochemical networks in living systems far from equilibrium + (Hong Qian)
- Fluctuation theorems for quantum processes + (Tameem Albash)
- Realm of validity of the Crooks relation + (Daniel Ben-Avraham)
- Methods for quantifying the informational structure of sensory and motor data + (Max Lungarella)
- Attractant- and Disulfide-Induced Conformational Changes in the Ligand Binding Domain of the Chemotaxis Aspartate Receptor: A 19F NMR Study + (Mark A. Danielson)
- Distributed hierarchical processing in the primate cerebral cortex + (Daniel J. Felleman)
- Free energy for protein folding from nonequilibrium simulations using the Jarzynski equality + (Daniel K. West)
- Classical and quantum fluctuation theorems for heat exchange + (Christopher Jarzynski)
- The brain's default network: Anatomy, function, and relevance to disease + (Randy L. Buckner)
- Bayesian integration in sensorimotor learning + (Konrad P. Körding)
- Theory of a Systematic Computational Error in Free Energy Differences + (Daniel M. Zuckerman)
- Single-ensemble nonequilibrium path-sampling estimates of free energy differences + (F. Marty Ytreberg)
- An intermediate level of abstraction for computational systems chemistry + (Jakob L. Andersen)
- Maximizing output and recognizing autocatalysis in chemical reaction networks is NP-complete + (Jakob L. Andersen)
- Intraglomerular inhibition: Signaling mechanisms of an olfactory microcircuit + (Gabe J. Murphy)
- Efficient physical embedding of topologically complex information processing networks in brains and computer circuits +
- Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMENTHYLASE3 + (Anders M. Lindroth)
- A rigorous derivation of the chemical master equation + (Daniel T. Gillespie)
- A general method for numerically simulating the stochastic time evolution of coupled chemical reactions + (Daniel T. Gillespie)
- Relationship between subsistence and age at weaning in "preindustrial" societies + (Daniel W. Sellen)
- The role of glial glutamate transporters in maintaining the independent operation of juvenile mouse cerebellar parallel fibre synapses + (Païkan Marcaggi)
- Gallavotti-Cohen-Type Symmetry Related to Cycle Decompositions for Markov Chains and Biochemical Applications + (Alessandra Faggionato)
- Efficient physical embedding of topologically complex information processing networks in brains and computer circuits + (Danielle S. Bassett)
- Human brain networks in health and disease + (Danielle S. Bassett)
- Small-world brain networks + (Danielle Smith Bassett)
- TrxG and PcG proteins but not methylated histones remain associated with DNA through replication + (Svetlana Petruk)
- A small world of neuronal synchrony + (Shan Yu)
- Asymmetrically modified nucleosomes + (Philipp Voigt)
- Chromatin structure and the inheritance of epigenetic information + (Raphaël Margueron)
- Role of the polycomb protein EED in the propagation of repressive histone marks + (Raphael Margueron)
- Emergent complex neural dynamics + (Dante R. Chialvo)
- Organization, development and function of complex brain networks + (Olaf Sporns)
- Functional brain network efficiency predicts intelligence + (Nicolas Langer)
- Consensus paper: The cerebellum's role in movement and cognition + (Leonard F. Koziol)
- Modular verification of chemical reaction network encodings via serializability analysis + (Matthew R. Lakin)
- Cooperative binding of two acetylation marks on a histone tail by a single bromodomain + (Jeanne Morinière)
- Discriminatory proofreading regimes in nonequilibrium systems + (Arvind Murugan)
- Synthetic molecular motors and mechanical machines + (Euan R. Kay)
- A molecular information ratchet + (Viviana Serreli)
- Rapid Neocortical Dynamics: Cellular and Network Mechanisms + (Bilal Haider)
- Inhibitory postsynaptic potentials carry synchronized frequency information in active cortical networks + (Andrea Hasenstaub)
- Measures of trajectory ensemble disparity in nonequilibrium statistical dynamics + (David A. Sivak)
- Thermodynamics of prediction + (Susanne Still)
- Thermodynamics of genuine nonequilibrium states under feedback control + (David Abreu)
- Fluctuation theorem for currents and Schnakenberg network theory + (David Andrieux)
- Fluctuation theorem for transport in mesoscopic systems + (David Andrieux)
- Fluctuation theorems and the nonequilibrium thermodynamics of molecular motors + (David Andrieux)
- Network and thermodynamic conditions for a single macroscopic current fluctuation theorem + (David Andrieux)