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From Thermodynamics of Computation
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List of results
- Computation with finite stochastic chemical reaction networks + (David Soloveichik)
- DNA as a universal substrate for chemical kinetics (Extended Abstract) + (David Soloveichik)
- Enzyme-free nucleic acid logic circuits + (Georg Seelig)
- Enzyme-free nucleic acid dynamical systems + (Niranjan Srinivas)
- Construction of an in vitro bistable circuit from synthetic transcriptional switches + (Jongmin Kim)
- Control of DNA strand displacement kinetics using toehold exchange + (David Yu Zhang)
- Efficient turing-universal computation with DNA polymers + (Lulu Qian)
- Synthetic in vitro transcriptional oscillators + (Jongmin Kim)
- Diversity in the dynamical behaviour of a compartmentalized programmable biochemical oscillator + (Maximilian Weitz)
- Verifying chemical reaction network implementations: A pathway decomposition approach + (Seung Woo Shin)
- Realization of a feedback controlled flashing ratchet + (Benjamin J. Lopez)
- Entropy production of cyclic population dynamics + (Benjamin Andrae)
- Brownian motion: A paradigm of soft matter and biological physics + (Erwin Frey)
- Extinction in neutrally stable stochastic Lotka-Volterra models + (Alexander Dobrinevski)
- Synthetic molecular motors and mechanical machines + (Euan R. Kay)
- A molecular information ratchet + (Viviana Serreli)
- An analytical solution to the kinetics of breakable filament assembly + (Christopher A. Waudby)
- One-component systems dominate signal transduction in prokaryotes + (Luke E. Ulrich)
- Distribution of oxygen tension on the surface of arterioles, capillaries and venules of brain cortex and in tissue in normoxia: An experimental study on rats + (Eugene Vovenko)
- Nonlinear response and fluctuation-dissipation relations + (Eugenio Lippiello)
- Off-equilibrium generalization of the fluctuation dissipation theorem for Ising spins and measurement of the linear response function + (Eugenio Lippiello)
- Fluctuation dissipation relations far from equilibrium + (Federico Corberi)
- Networks, dynamics, and modularity + (Evan A. Variano)
- Variable channel expression in identified single and electrically coupled neurons in different animals + (David J. Schulz)
- Variability, compensation and homeostasis in neuron and network function + (Eve Marder)
- ChIP-seq analysis reveals distinct H3K27me3 profiles that correlate with transcriptional activity + (Evelyn Trounson)
- Effective temperature of red-blood-cell membrane fluctuations + (Eyal Ben-Isaac)
- Gene expression of Caenorhabditis elegans neurons carries information on their synaptic connectivity + (Alon Kaufman)
- Nonequilibrium fluctuations in small systems: from physics to biology + (F 2008 Ritort)
- Correlated morphometric and biochemical studies on the liver cell. I. Morphometric model, stereologic methods, and normal morphometric data for rat liver. + (E. R. Weibel)
- Nonequilibrium mechanics of active cytoskeletal networks + (Daisuke Mizuno)
- The mechanics and fluctuation spectrum of active gels + (Alex J. Levine)
- Generalised Einstein relation for hot Brownian motion + (D. Chakraborty)
- Estimate of the free energy difference in mechanical systems from work fluctuations: Experiments and models + (F. Douarche)
- An experimental test of the Jarzynski equality in a mechanical experiment + (F. Douarche)
- Work fluctuation theorems for harmonic oscillators + (F. Douarche)
- Predictive information and explorative behavior of autonomous robots + (N. Ay)
- Stochasticity of gene products from transcriptional pulsing + (Srividya Iyer-Biswas)
- General mass action kinetics + (F. Horn)
- Necessary and sufficient conditions for complex balancing in chemical kinetics + (F. Horn)
- Information and maximum power in a feedback controlled Brownian ratchet + (M. Feito)
- Optimal operation of feedback flashing ratchets + (M. Feito)
- Closed-loop control strategy with improved current for a flashing ratchet + (L. Dinis)
- Information and flux in a feedback controlled Brownian ratchet + (F. J. Cao)
- Thermodynamics of feedback controlled systems + (F. J. Cao)
- Efficiency of a Carnot engine at maximum power output + (F. L. Curzon)
- Single-ensemble nonequilibrium path-sampling estimates of free energy differences + (F. Marty Ytreberg)
- Observation of non-Hermitian degeneracies in a chaotic exciton-polariton billiard + (T. Gao)
- Measuring the fluctuation-dissipation ratio in glassy systems with no perturbing field + (F. Ricci-Tersenghi)
- Single-photon detection by rod cells of the retina + (F. Rieke)
- Dynamic force spectroscopy of DNA hairpins: I. Force kinetics and free energy landscapes + (A. Mossa)