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From Thermodynamics of Computation
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- Age-related alterations in the modular organization of structural cortical network by using cortical thickness from MRI + (Zhang J. Chen)
- Revealing modular architecture of human brain structural networks by using cortical thickness from MRI + (Zhang J. Chen)
- Computation on stochastic bit streams digital image processing case studies + (Peng Li)
- A stochastic reconfigurable architecture for fault-tolerant computation with sequential logic + (Peng Li)
- Logical computation on stochastic bit streams with linear finite-state machines + (Peng Li)
- Programming biomolecular self-assembly pathways + (Peng Yin)
- Programming DNA tube circumferences + (Peng Yin)
- Criticism of Feynman’s analysis of the ratchet as an engine + (Juan M. R. Parrondo)
- Run-time exploitation of application dynamism for energy-efficient exascale computing (READEX) + (Yury Oleynik)
- Correlated evolution of nearby residues in drosophilid proteins + (Benjamin Callahan)
- Engineering aspects of enzymatic signal transduction: Photoreceptors in the retina + (Peter B. Detwiler)
- The quiet revolution of numerical weather prediction + (Peter Bauer)
- Free energy for protein folding from nonequilibrium simulations using the Jarzynski equality + (Daniel K. West)
- The limits of chemosensation vary across dimensions + (Brendan A. Bicknell)
- Analyzing molecular reaction networks: From pathways to chemical organizations + (Christoph Kaleta)
- Fluctuation theorems: Work is not an observable + (Peter Talkner)
- Erratum: Quantum fluctuation relations: Foundations and applications (Reviews of Modern Physics) + (Michele Campisi)
- Fluctuation theorem for arbitrary open quantum systems + (Michele Campisi)
- Distribution of astroglia in glomeruli of the rat main olfactory bulb: Exclusion from the sensory subcompartment of neuropil + (T. Ivo Chao)
- The cost of cortical computation + (Peter Lennie)
- Drivers of bacterial maintenance and minimal energy requirements + (Peter M. van Bodegom)
- Targeting olfaction + (Peter Mombaerts)
- Brownian motors: Noisy transport far from equilibrium + (Peter Reimann)
- Propagation of histone marks and epigenetic memory during normal and interrupted DNA replication + (Peter Sarkies)
- Synergism between different germinant receptors in the germination of Bacillus subtilis spores + (Xuan Yi)
- Workshop report:Modeling the molecularmechanism of bacterial spore germination and elucidating reasons for germination heterogeneity + (Karl J. Indest)
- Molecular taxonomy of major neuronal classes in the adult mouse forebrain + (Ken Sugino)
- Observable dependence of fluctuation-dissipation relations and effective temperatures + (Suzanne Fielding)
- An intermediate level of abstraction for computational systems chemistry + (Peter Stadler)
- Transitions from Nonliving to Living Matter + (Peter Stadler)
- Defining genes: A computational framework + (Peter Stadler)
- Chromatin measurements reveal contributions of synthesis and decay to steady-state mRNA levels + (Peter Stadler)
- Maximizing output and recognizing autocatalysis in chemical reaction networks is NP-complete + (Peter Stadler)
- TRNAdb 2009: Compilation of tRNA sequences and tRNA genes + (Peter Stadler)
- Innovation in gene regulation: The case of chromatin computation + (Peter Stadler)
- Design of a trichromatic cone array + (Patrick Garrigan)
- Receptive fields and functional architecture in the retina + (Vijay Balasubramanian)
- How Much the Eye Tells the Brain + (Kristin Koch)
- Retina + (Peter Sterling)
- Chromatin and epigenetic regulation of pre-mrna processing + (Seth J. Brown)
- Pooled energy budgets: Resituating human energy -allocation trade-offs + (Karen L. Kramer)
- Systematic errors in free energy perturbation calculations due to a finite sample of configuration space: Sample-size hysteresis + (Robert H. Wood)
- Fluctuation theorems: Work is not an observable + (Peter Talkner)
- Erratum: Quantum fluctuation relations: Foundations and applications (Reviews of Modern Physics) + (Michele Campisi)
- Fluctuation theorem for arbitrary open quantum systems + (Michele Campisi)
- Broken symmetries and the masses of gauge bosons + (Peter W. Higgs)
- The Expensive-Tissue Hypothesis: The Brain and the Digestive System in Human and Primate Evolution + (Leslie C. Aiello)
- Energetics and performance of a microscopic heat engine based on exact calculations of work and heat distributions + (Petr Chvosta)
- The anatomical distance of functional connections predicts brain network topology in health and schizophrenia + (Aaron F. Alexander-Bloch)
- The lac repressor displays facilitated diffusion in living cells + (Petter Hammar)
- Irreversibilities and efficiency at maximum power of heat engines: The illustrative case of a thermoelectric generator + (Y. Apertet)
- Small-world networks and functional connectivity in Alzheimer's disease + (C. J. Stam)
- Article for analog vector algebra computation + (Allen P. Mills)
- Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain + (Andrew J. Bannister)
- Optimum protocol for fast-switching free-energy calculations + (Philipp Geiger)
- Thermodynamics of a physical model implementing a Maxwell demon + (Philipp Strasberg)
- Asymmetrically modified nucleosomes + (Philipp Voigt)