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List of results

• The anatomical distance of functional connections predicts brain network topology in health and schizophrenia  + (Aaron F. Alexander-Bloch)
• Quantifying noise levels of intercellular signals  + (Kai Wang)
• A Map of the Interactome Network of the Metazoan C. elegans  + (Siming Li)
• Histone modifications at human enhancers reflect global cell-type-specific gene expression  + (Nathaniel D. Heintzman)
• Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome  + (Nathaniel D. Heintzman)
• Improving fast-switching free energy estimates by dynamical freezing  + (Paolo Nicolini)
• Glucans monomer-exchange dynamics as an open chemical network  + (Riccardo Rao)
• Correlated evolution of nearby residues in drosophilid proteins  + (Benjamin Callahan)
• Representations of Odor in the Piriform Cortex  + (Dan D. Stettler)
• RNA sequence analysis using covariance models  + (Sean R. Eddy)
• Second-order selection for evolvability in a large Escherichia coli population  + (Robert J. Woods)
• The evolutionary origin of complex features  + (Richard E. Lenski)
• Genome evolution and adaptation in a long-term experiment with Escherichia coli  + (Jeffrey E. Barrick)
• Nonequilibrium thermodynamics of stochastic systems with odd and even variables  + (Richard E. Spinney)
• Entropy production in full phase space for continuous stochastic dynamics  + (Richard E. Spinney)
• Efficient checking of computations  + (Richard J. Lipton)
• Reducibility among combinatorial problems  + (Richard M. Karp)
• Quantum mechanical computers  + (Richard P. Feynman)
• Influence of combinatorial histone modifications on antibody and effector protein recognition  + (Stephen M. Fuchs)
• Stretching the limits of clock-gating efficiency in server-class processors  + (Hans Jacobson)
• Programmable and autonomous computing machine made of biomolecules  + (Yaakov Benenson)
• Programming DNA tube circumferences  + (Peng Yin)
• Novel algorithms for fast statistical analysis of scaled circuits  + (Amith Singhee)
• Entropic tension in crowded membranes  + (Martin Lindén)
• Statistical mechanics of Monod-Wyman-Changeux (MWC) models  + (Sarah Marzen)

• Holographic Second Laws of Black Hole Thermodynamics  + (Robert C. Myers)

• Stochastic arithmetic implementations of neural networks with in situ learning  + (Jeffrey A. Dickson)
• Increased accuracy of ligand sensing by receptor diffusion on cell surface  + (Gerardo Aquino)
• Maximum likelihood and the single receptor  + (Robert G. Endres)
• Accuracy of direct gradient sensing by cell-surface receptors  + (Robert G. Endres)
• Unraveling Adaptation in Eukaryotic Pathways: Lessons from Protocells  + (Giovanna de Palo)
• Memory improves precision of cell sensing in fluctuating environments  + (Gerardo Aquino)
• Energetic basis of brain activity: Implications for neuroimaging  + (Robert G. Shulman)
• Path integral formulation of general diffusion processes  + (Robert Graham)
• Systematic errors in free energy perturbation calculations due to a finite sample of configuration space: Sample-size hysteresis  + (Robert H. Wood)
• Optimizing Google's warehouse scale computers: The NUMA experience  + (Lingjia Tang)
• Increasing utilization in modern warehouse-scale computers using Bubble-Up  + (Jason Mars)
• Chromatin measurements reveal contributions of synthesis and decay to steady-state mRNA levels  + (Sylvia C. Tippmann)
• The work-Hamiltonian connection and the usefulness of the Jarzynski equality for free energy calculations  + (Eric N. Zimanyi)
• Second-order selection for evolvability in a large Escherichia coli population  + (Robert J. Woods)
• Recognition of a mononucleosomal histone modification pattern by BPTF via multivalent interactions  + (Alexander J. Ruthenburg)
• Nucleosome organization in the Drosophila genome  + (Travis N. Mavrich)
• Computational design and experimental validation of oligonucleotide-sensing allosteric ribozymes  + (Robert Penchovsky)
• Programmable energy landscapes for kinetic control of DNA strand displacement  + (Thomas E. Ouldridge)
• The evolutionary origin of complex features  + (Richard E. Lenski)
• Structure and function of a human TAF(II)250 double bromodomain module  + (Raymond H. Jacobson)
• Quantum probabilities from quantum entanglement: Experimentally unpacking the Born rule  + (Jérémie Harris)
• Life in the slow lane revisited: Ontogenetic separation between chimpanzees and humans  + (Robert Walker)
• Argonaute proteins couple chromatin silencing to alternative splicing  + (Maya Ameyar-Zazoua)
• Nucleosomes are well positioned in exons and carry characteristic histone modifications  + (Robin Andersson)
• Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain  + (Andrew J. Bannister)