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List of results

• Chemomechanical coupling of molecular motors: Thermodynamics, network representations, and balance conditions  + (Reinhard Lipowsky)
• Nucleosome organization in the Drosophila genome  + (Travis N. Mavrich)
• Intermittent Transcription Dynamics for the Rapid Production of Long Transcripts of High Fidelity  + (Martin Depken)
• A Map of the Interactome Network of the Metazoan C. elegans  + (Siming Li)
• Leveraging program equivalence for adaptive program repair: Models and first results  + (Westley Weimer)
• The ManyBugs and IntroClass Benchmarks for Automated Repair of C Programs  + (Claire Le Goues)
• Energy allocation between brain and body during ontogenetic development  + (Britta Kubera)
• Visual DSD: A design and analysis tool for DNA strand displacement systems  + (Matthew R. Lakin)
• Influence of combinatorial histone modifications on antibody and effector protein recognition  + (Stephen M. Fuchs)
• Network modelling methods for FMRI  + (Stephen M. Smith)
• Sparse complete sets for NP: Solution of a conjecture of Berman and Hartmanis  + (Stephen R. Mahaney)
• Central role of Drosophila SU(VAR)3-9 in histone H3-K9 methylation and heterochromatic gene silencing  + (Gunnar Schotta)
• Global and local thermometry schemes in coupled quantum systems  + (Steve Campbell)
• Equilibrium information from nonequilibrium measurements in an experimental test of Jarzynski's equality  + (Jan Liphardt)
• Response and habituation of the human amygdala during visual processing of facial expression  + (Hans C. Breiter)
• Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMENTHYLASE3  + (Anders M. Lindroth)
• Functional brain networks develop from a "local to distributed" organization  + (Damien A. Fair)
• Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion  + (Jonathan D. Power)
• Collective dynamics of 'small-world' networks  + (Duncan J. Watts)
• Role of the polycomb protein EED in the propagation of repressive histone marks  + (Raphael Margueron)
• A quantitative analysis of sniffing strategies in rats performing odor detection tasks  + (Steven L. Youngentob)
• Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements  + (Anshul Kundaje)
• Natural Proofs  + (Alexander A. Razborov)
• High-energy behavior in quantum field theory  + (Steven Weinberg)
• Small-world properties of nonlinear brain activity in schizophrenia  + (Mikail Rubinov)

• A Map of the Interactome Network of the Metazoan C. elegans  + (Stuart Milstein)

• The connection between logical and thermodynamic irreversibility  + (James Ladyman)
• Microstructure of a spatial map in the entorhinal cortex  + (Torkel Hafting)
• The unique games conjecture, integrality gap for cut problems and embeddability of negative type metrics into l 1  + (Subhash A. Khot)
• Vertex cover might be hard to approximate to within 2 - ε  + (Subhash Khot)
• ERSA: Error resilient system architecture for probabilistic applications  + (Hyungmin Cho)
• Tolerating Soft Errors in Processor Cores Using CLEAR (Cross-Layer Exploration for Architecting Resilience)  + (Eric Cheng)
• An efficient graph theory based method to identify every minimal reaction set in a metabolic network  + (Sudhakar Jonnalagadda)
• Analog Computation by DNA Strand Displacement Circuits  + (Tianqi Song)
• Programming DNA tube circumferences  + (Peng Yin)
• An information theoretical analysis of kinase activated phosphorylation dephosphorylation cycle  + (Hong Qian)
• Genome evolution and adaptation in a long-term experiment with Escherichia coli  + (Jeffrey E. Barrick)
• Instrumentation applications of multibit random-data representation  + (Emil M. Petriu)
• Density-dependent analysis of nonequilibrium paths improves free energy estimates II. A Feynman-Kac formalism  + (David D.L. Minh)
• Escorted free energy simulations: Improving convergence by reducing dissipation  + (Suriyanarayanan Vaikuntanathan)
• Nonequilibrium detailed fluctuation theorem for repeated discrete feedback  + (Jordan M. Horowitz)
• Modeling Maxwell's demon with a microcanonical Szilard engine  + (Suriyanarayanan Vaikuntanathan)
• A Map of the Interactome Network of the Metazoan C. elegans  + (Siming Li)
• The folding cooperativity of a protein is controlled by its chain topology  + (Elizabeth A. Shank)
• Yeast HOG1 MAP kinase cascade is regulated by a multistep phosphorelay mechanism in the SLN1-YPD1-SSK1 'two-component' osmosensor  + (Francesc Posas)
• Thermodynamics of prediction  + (Susanne Still)
• Stochastic equations in black hole backgrounds and non-equilibrium fluctuation theorems  + (Satoshi Iso)
• Observable dependence of fluctuation-dissipation relations and effective temperatures  + (Suzanne Fielding)
• Realm of validity of the Crooks relation  + (Daniel Ben-Avraham)
• Fluctuation ratios in the absence of microscopic time reversibility  + (Sven Dorosz)
• Phosphorylation and regulation of Raf by Akt (protein kinase B)  + (Sven Zimmermann)