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From Thermodynamics of Computation
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List of results
- Effect of ligand diffusion on occupancy fluctuations of cell-surface receptors + (Alexander M. Berezhkovskii)
- Quantum-to-classical transition in the work distribution for chaotic systems + (Ignacio García-Mata)
- Instrumentation applications of multibit random-data representation + (Emil M. Petriu)
- Hardness vs randomness + (Noam Nisan)
- On rank vs. communication complexity + (Noam Nisan)
- Monotone Circuits for Connectivity Require Super-Logarithmic Depth + (Mauricio Karchmer)
- Fast signals and slow marks: the dynamics of histone modifications + (Teresa K. Barth)
- Experimental verification of Landauer's principle in erasure of nanomagnetic memory bits + (J Hong)
- Efficiency of a Carnot engine at maximum power output + (F. L. Curzon)
- Network representations of nonequilibrium steady states: Cycle decompositions, symmetries, and dominant paths + (B. Altaner)
- Neurochemical organization of the macaque striate cortex: Correlation of cytochrome oxidase with Na+K+ATPase, NADPH-diaphorase, nitric oxide synthase, and N-methyl-D-aspartate receptor subunit 1 + (M. Wong-Riley)
- The superfamily of heme-copper respiratory oxidases + (J. A. Garcia-Horsman)
- Nucleosome positioning and gene regulation: Advances through genomics + (Cizhong Jiang)
- Stochastic thermodynamics and sustainable efficiency in work production + (B. Gaveau)
- Constrained maximal power in small engines + (B. Gaveau)
- Stochastic dynamics, efficiency and sustainable power production + (M. Moreau)
- BMI peak in infancy as a predictor for later BMI in the Uppsala Family Study + (R. J. Silverwood)
- Histone acetylation as an epigenetic determinant of long-term transcriptional competence + (B. M. Turner)
- Longitudinal gradients in periarteriolar oxygen tension. A possible mechanism for the participation of oxygen in local regulation of blood flow. + (B. R. Duling)
- Reaching optimal efficiencies using nanosized photoelectric devices + (B. Rutten)
- Probability currents as principal characteristics in the statistical mechanics of non-equilibrium steady states + (R. K.P. Zia)
- A possible classification of nonequilibrium steady states + (B. Schmittmann)
- Stretching the limits of clock-gating efficiency in server-class processors + (Hans Jacobson)
- Chromatin computation + (Barbara Bryant)
- Progressive methylation of ageing histones by Dot1 functions as a timer + (Dirk De Vos)
- Humans are not cooperative breeders but practice biocultural reproduction + (Barry Bogin)
- Cerebellar Golgi cells in the rat: Receptive fields and timing of responses to facial stimulation + (Bart P. Vos)
- Thermodynamic universality of quantum Carnot engines + (Bartłomiej Gardas)
- Complex and detailed balancing of chemical reaction networks revisited + (Arjan van der Schaft)
- A graph-theoretical approach for the analysis and model reduction of complex-balanced chemical reaction networks + (Shodhan Rao)
- Cooperative multicomponent self-assembly of nucleic acid structures for the activation of DNAzyme cascades: A paradigm for DNA sensors and aptasensors + (Johann Elbaz)
- Logic gates and antisense DNA devices operating on a translator nucleic acid scaffold + (Bella Shlyahovsky)
- Making molecular machines work + (Wesley R. Browne)
- Asymmetrically modified nucleosomes + (Philipp Voigt)
- Entropy production of cyclic population dynamics + (Benjamin Andrae)
- Dissipation Bound for Thermodynamic Control + (Benjamin B. Machta)
- Fluctuation theorems for entropy production and heat dissipation in periodically driven Markov chains + (Benjamin Hertz Shargel)
- Wiring cost in the organization of a biological neuronal network + (Yong Yeol Ahn)
- Non-equilibrium steady states: Fluctuations and large deviations of the density and of the current + (Bernard Derrida)
- A general framework for non-equilibrium phenomena: The master equation and its formal consequences + (Bernard Gaveau)
- The conscious access hypothesis: Origins and recent evidence + (Bernard J. Baars)
- A DNA-fuelled molecular machine made of DNA + (Bernard Yurke)
- Article for analog vector algebra computation + (Allen P. Mills)
- Perfect and near-perfect adaptation in a model of bacterial chemotaxis + (Bernardo A. Mello)
- Cube v4: From performance report explorer to performance analysis tool + (Pavel Saviankou)
- Fluctuation-preserving coarse graining for biochemical systems + (Bernhard Altaner)
- Fluctuating currents in stochastic thermodynamics. II. Energy conversion and nonequilibrium response in kinesin models + (Bernhard Altaner)
- The connection between logical and thermodynamic irreversibility + (James Ladyman)
- Structural properties of the Caenorhabditis elegans neuronal network + (Lav R. Varshney)
- Quantum-classical correspondence principle for work distributions in a chaotic system + (Long Zhu)
- Rapid Neocortical Dynamics: Cellular and Network Mechanisms + (Bilal Haider)
- Inhibitory postsynaptic potentials carry synchronized frequency information in active cortical networks + (Andrea Hasenstaub)
- Advocating noise as an agent for ultra-low energy computing: Probabilistic complementary metal-oxide-semiconductor devices and their characteristics + (Pinar Korkmaz)
- Improved thermometry of low-temperature quantum systems by a ring-structure probe + (Li Sha Guo)
- Readers of histone modifications + (Miyong Yun)
- Histone modifications at human enhancers reflect global cell-type-specific gene expression + (Nathaniel D. Heintzman)
- Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome + (Nathaniel D. Heintzman)
- Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification + (Minjia Tan)
- Single-molecule thermodynamics: The heat distribution function of a charged particle in a static magnetic field + (Debarati Chatterjee)
- Exact path-integral evaluation of the heat distribution function of a trapped Brownian oscillator + (Debarati Chatterjee)
- A 32-bit powerPC system-on-a-chip with support for dynamic voltage scaling and dynamic frequency scaling + (Kevin J. Nowka)
- Current trends in finite-time thermodynamics + (Bjarne Andresen)
- Life under extreme energy limitation: A synthesis of laboratory- and field-based investigations + (Mark A. Lever)
- Microbial life under extreme energy limitation + (Tori M. Hoehler)
- The Effect of Phenobarbitone Anaesthesia on Blood Flow and Oxygen Consumption in the Rat Brain + (Lorentz Nilsson)
- Minimal model for Brownian vortexes + (Bo Sun)
- Calculating potentials of mean force and diffusion coefficients from nonequilibrium processes without Jarzynski's equality + (Ioan Kosztin)
- Energy representation for nonequilibrium Brownian-like systems: Steady states and fluctuation relations + (Bohdan I. Lev)
- Reachability bounds for chemical reaction networks and strand displacement systems + (Anne Condon)
- Optimal information storage and the distribution of synaptic weights: Perceptron versus Purkinje cell + (Nicolas Brunel)
- Neuroscience: Hemodynamic signals correlate tightly with synchronized gamma oscillations + (Jörn Niessing)
- Engineering aspects of enzymatic signal transduction: Photoreceptors in the retina + (Peter B. Detwiler)
- Correlated evolution of nearby residues in drosophilid proteins + (Benjamin Callahan)
- Effective confinement as origin of the equivalence of kinetic temperature and fluctuation-dissipation ratio in a dense shear-driven suspension + (Boris Lander)
- Transient fluctuation relations for time-dependent particle transport + (Alexander Altland)
- Fluctuation relations and rare realizations of transport observables + (Alexander Altland)
- An efficient 10GBASE-T ethernet LDPC decoder design with low error floors + (Zhengya Zhang)
- Computational design of nucleic acid feedback control circuits + (Boyan Yordanov)
- Genetic Algorithms, Tournament Selection, and the Effects of Noise + (Brad L Miller)
- Stochastic neural computation I: Computational elements + (Bradley D. Brown)
- Computational selection of nucleic acid biosensors via a slip structure model + (Bradley Hall)
- Functional brain networks develop from a "local to distributed" organization + (Damien A. Fair)
- Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion + (Jonathan D. Power)
- Seflab: A lab for measuring software energy footprints + (Miguel A. Ferreira)
- The entropy and efficiency of a molecular motor model + (Eliran Boksenbojm)
- Dynamical fluctuations for periodically driven diffusions + (Navinder Singh)
- The limits of chemosensation vary across dimensions + (Brendan A. Bicknell)
- Quantum techniques for studying equilibrium in reaction networks + (John C. Baez)
- Factor graphs and the sum-product algorithm + (Frank R. Kschischang)
- Influence of combinatorial histone modifications on antibody and effector protein recognition + (Stephen M. Fuchs)
- A general model for ontogenetic growth + (Geoffrey B. West)
- A general model for the structure and allometry of plant vascular systems + (Geoffrey B. West)
- Exploring the thermodynamic limits of computation in integrated systems: Magnetic memory, nanomagnetic logic, and the landauer limit + (Brian Lambson)
- Realization of a feedback controlled flashing ratchet + (Benjamin J. Lopez)
- New evidence for hominin carcass processing strategies at 1.5 Ma, Koobi Fora, Kenya + (Briana L. Pobiner)
- A Map of the Interactome Network of the Metazoan C. elegans + (Siming Li)
- Energy allocation between brain and body during ontogenetic development + (Britta Kubera)
- Sodium Entry during Action Potentials of Mammalian Neurons: Incomplete Inactivation and Reduced Metabolic Efficiency in Fast-Spiking Neurons + (Brett C. Carter)
- Response and habituation of the human amygdala during visual processing of facial expression + (Hans C. Breiter)
- Sparse coding with an overcomplete basis set: A strategy employed by V1? + (Bruno A. Olshausen)
- The statistical neuroanatomy of frontal networks in the macaque + (Bruno B. Averbeck)
- The microvascular system of the striate and extrastriate visual cortex of the macaque + (Bruno Weber)
- Nucleosome organization in the Drosophila genome + (Travis N. Mavrich)
- The adjustable nucleosome: An epigenetic signaling module + (Bryan M. Turner)
- Role of hidden slow degrees of freedom in the fluctuation theorem + (J. Mehl)
- Thermodynamics of a colloidal particle in a time-dependent nonharmonic potential + (V. Blickle)
- Thermodynamic constraints on kinetic proofreading in biosynthetic pathways + (M. Ehrenberg)
- The physics of molecular motors + (C. Bustamante)
- The connectional organization of the cortico-thalamic system of the cat + (J. W. Scannell)
- A temperature-extended Jarzynski relation: Application to the numerical calculation of surface tension + (C. Chatelain)
- Component-placement optimization in the brain + (M. P. Young)
- Translating the histone code + (T. Jenuwein)
- Recognition of a mononucleosomal histone modification pattern by BPTF via multivalent interactions + (Alexander J. Ruthenburg)
- Operating on chromatin, a colorful language where context matters + (Kathryn E. Gardner)
- Observation of the Kibble-Zurek scaling law for defect formation in ion crystals + (S. Ulm)
- Erratum: Differences in auditory and physiological properties of HVc neurons between reproductively active male and female canaries (Serinus canaria) (European Journal of Neuroscience (2001) 14 (1377-1389)) + (C. Del Negro)
- Parallel fibre receptive fields of purkinje cells and interneurons are climbing fibre-specific + (C. F. Ekerot)
- Nonequilibrium mechanics of active cytoskeletal networks + (Daisuke Mizuno)
- Irreversibilities and efficiency at maximum power of heat engines: The illustrative case of a thermoelectric generator + (Y. Apertet)
- The complexity of facets (and some facets of complexity) + (C. H. Papadimitriou)
- Nitric oxide and adenosine mediate vasodilation during functional activation in cerebellar cortex + (J. Li)
- Small-world networks and functional connectivity in Alzheimer's disease + (C. J. Stam)
- Equilibrium free-energy differences from nonequilibrium measurements: A master-equation approach + (C. Jarzynski)
- Nonequilibrium equality for free energy differences + (C. Jarzynski)
- Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies + (D. Collin)
- Dissipation and lag in irreversible processes + (S. Vaikuntanathan)
- Stochasticity of gene products from transcriptional pulsing + (Srividya Iyer-Biswas)
- Invariant visual representation by single neurons in the human brain + (R. Quian Quiroga)
- Housekeeping entropy in continuous stochastic dynamics with odd-parity variables + (J. Yeo)
- Experimental test of the Gallavotti-Cohen fluctuation theorem in turbulent flows + (S. Ciliberto)
- Weight consistency specifies regularities of macaque cortical networks + (N. T. Markov)
- Einstein relation generalized to nonequilibrium + (V. Blickle)
- Quantum entropy production as a measure of irreversibility + (I. Callens)
- An update on the nonequilibrium linear response + (M. Baiesi)
- Maxwell's demon assisted thermodynamic cycle in superconducting quantum circuits + (H. T. Quan)
- Taming the complexity of biochemical models through bisimulation and collapsing: Theory and practice + (M. Antoniotti)
- Experimental implementation of a nonthermalizing quantum thermometer + (C. Raitz)
- Characterizing plastic depinning dynamics with the fluctuation theorem + (J. A. Drocco)
- Observation of non-Hermitian degeneracies in a chaotic exciton-polariton billiard + (T. Gao)
- Experimental test of the fluctuation theorem for a driven two-level system with time-dependent rates + (S. Schuler)
- Measurement of stochastic entropy production + (C. Tietz)
- Second law and Landauer principle far from equilibrium + (C. Van Den Broeck)
- Lower bounds on dissipation upon coarse graining + (A. Gomez-Marin)
- Thermoelectric efficiency at maximum power in a quantum dot + (K. Lindenberg)
- Finite-time thermodynamics for a single-level quantum dot + (R. Kawai)
- Jarzynski equality for the Jepsen gas + (I. Bena)
- Stochastic thermodynamics for linear kinetic equations + (C. Van Den Broeck)
- Giant acceleration of free diffusion by use of tilted periodic potentials + (P. Reimann)
- Probabilistic mapping and volume measurement of human primary auditory cortex + (J. Rademacher)
- Molecular taxonomy of major neuronal classes in the adult mouse forebrain + (Ken Sugino)
- Symmetries of generating functionals of Langevin processes with colored multiplicative noise + (Camille Aron)
- Energetics and the evolution of human brain size + (Ana Navarrete)
- Life history costs and benefits of encephalization: a comparative test using data from long-term studies of primates in the wild + (Nancy L. Barrickman)
- Costs of encephalization: the energy trade-off hypothesis tested on birds + (Karin Isler)
- Disrupted axonal fiber connectivity in schizophrenia + (Andrew Zalesky)
- Complex Extension of Quantum Mechanics + (Carl M. Bender)
- Real spectra in non-hermitian hamiltonians having PT symmetry + (Carl M. Bender)
- Cooperative binding of two acetylation marks on a histone tail by a single bromodomain + (Jeanne Morinière)
- A (sub)graph isomorphism algorithm for matching large graphs + (Luigi P. Cordella)
- Earth mover's distance as a metric for image retrieval + (Yossi Rubner)
- Fuzzy Memoization for Floating-Point Multimedia Applications + (Carlos Alvarez)
- Equilibrium information from nonequilibrium measurements in an experimental test of Jarzynski's equality + (Jan Liphardt)
- Bayesian estimates of free energies from nonequilibrium work data in the presence of instrument noise + (Paul Maragakis)
- The folding cooperativity of a protein is controlled by its chain topology + (Elizabeth A. Shank)
- Performance assessment of multiobjective optimizers: An analysis and review + (Eckart Zitzler)
- Heat Release by Controlled Continuous-Time Markov Jump Processes + (Paolo Muratore-Ginanneschi)
- Optimal protocols and optimal transport in stochastic thermodynamics + (Erik Aurell)
- Boundary layers in stochastic thermodynamics + (Erik Aurell)
- Refined Second Law of Thermodynamics for Fast Random Processes + (Erik Aurell)
- New device for high-throughput viability screening of flow biofilms + (Michael R. Benoit)
- Experience-dependent rescaling of entorhinal grids + (Caswell Barry)
- Perceiving the epigenetic landscape through histone readers + (Catherine A. Musselman)
- Genome-wide patterns of histone modifications in yeast + (Catherine B. Millar)
- Nonequilibrium mechanics of active cytoskeletal networks + (Daisuke Mizuno)
- Time-frequency dynamics of resting-state brain connectivity measured with fMRI + (Catie Chang)
- Symbiotic relationship between brain structure and dynamics + (Mikail Rubinov)
- Characterization of the RNA content of chromatin + (Tanmoy Mondal)
- Forward flux sampling for rare event simulations + (Rosalind J. Allen)
- Defining Network Topologies that Can Achieve Biochemical Adaptation + (Wenzhe Ma)
- Uncovering intrinsic modular organization of spontaneous brain activity in humans + (Yong He)
- Compartmental organization of the olfactory bulb glomerulus + (Hahnah J. Kasowski)
- Olfactory Bulb + (Gordon M. Shepherd)
- Postnatal development of olfactory receptor cell axonal arbors + (Jason R. Klenoff)
- Dietary constraints on encephalization in primates + (Jennifer L. Fish)
- The thermodynamics of computation-a review + (Charles H. Bennett)
- Dissipation-error tradeoff in proofreading + (Charles H. Bennett)
- Notes on Landauer's principle, reversible computation, and Maxwell's Demon + (Charles H. Bennett)
- Thermodynamics of statistical inference by cells + (Alex H. Lang)
- The evolutionary origin of complex features + (Richard E. Lenski)
- Design of a trichromatic cone array + (Patrick Garrigan)
- An estimate of the total DNA in the biosphere + (Hanna K.E. Landenmark)
- Tolerating Soft Errors in Processor Cores Using CLEAR (Cross-Layer Exploration for Architecting Resilience) + (Eric Cheng)
- Neurochemical organization of the macaque retina: Effect of TTX on levels and gene expression of cytochrome oxidase and nitric oxide synthase and on the immunoreactivity of Na+ K+ ATPase and NMDA receptor subunit I + (Margaret T.T. Wong-Riley)
- Consensus paper: The cerebellum's role in movement and cognition + (Leonard F. Koziol)
- Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements + (Anshul Kundaje)
- Aerobic glycolysis in the primate brain: Reconsidering the implications for growth and maintenance + (Amy L. Bauernfeind)
- Small modulation of ongoing cortical dynamics by sensory input during natural vision + (József Fiser)
- Finite time thermodynamic optimization or entropy generation minimization of energy systems + (Lingen Chen)
- A molecular information ratchet + (Viviana Serreli)
- Compiler optimization on instruction scheduling for low power + (Chingren Lee)
- Thermodynamic Costs of Information Processing in Sensory Adaptation + (Pablo Sartori)
- Computer simulation of Feynman's ratchet and pawl system + (Jianzhou Zheng)
- Cerebellar LTD and Pattern Recognition by Purkinje Cells + (Volker Steuber)
- Nonequilibrium work theorem for a system strongly coupled to a thermal environment + (Chris Jarzynski)
- Drivers of bacterial maintenance and minimal energy requirements + (Peter M. van Bodegom)
- Evolutionary tradeoffs in cellular composition across diverse bacteria + (Lawrence Wang)
- Verifying chemical reaction network implementations: A pathway decomposition approach + (Seung Woo Shin)
- Less haste, less waste: On recycling and its limits in strand displacement systems + (Anne Condon)
- Observation of parity-time symmetry in optics + (Christian E. Rüter)
- Network modelling methods for FMRI + (Stephen M. Smith)
- Fluctuations and response in a non-equilibrium micron-sized system + (Juan Ruben Gomez-Solano)
- Fluctuation symmetries for work and heat + (Marco Baiesi)
- A Nonequilibrium Extension of the Clausius Heat Theorem + (Christian Maes)
- Second law of thermodynamics for macroscopic mechanics coupled to thermodynamic degrees of freedom + (Christian Maes)
- Enstrophy dissipation in two-dimensional turbulence + (Marco Baiesi)
- Argonaute proteins couple chromatin silencing to alternative splicing + (Maya Ameyar-Zazoua)
- Nonequilibrium steady states in contact: Approximate thermodynamic structure and zeroth law for driven lattice gases + (Punyabrata Pradhan)
- Communications: Can one identify nonequilibrium in a three-state system by analyzing two-state trajectories? + (Christian P. Amann)
- Defining genes: A computational framework + (Sonja J. Prohaska)
- Stochastically driven single-level quantum dot: A nanoscale finite-time thermodynamic machine and its various operational modes + (Massimiliano Esposito)
- Three faces of the second law. I. Master equation formulation + (Massimiliano Esposito)
- Entropy production as correlation between system and reservoir + (Massimiliano Esposito)
- Three faces of the second law. I. Master equation formulation2 + (Massimiliano Esposito)
- Programmable ligand-controlled riboregulators of eukaryotic gene expression + (Travis S. Bayer)
- Odorant representations are modulated by intra- but not interglomerular presynaptic inhibition of olfactory sensory neurons + (John P. McGann)
- Histone modifications at human enhancers reflect global cell-type-specific gene expression + (Nathaniel D. Heintzman)
- Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome + (Nathaniel D. Heintzman)
- Integrated information increases with fitness in the evolution of animats + (Jeffrey A. Edlund)
- The neural correlates of consciousness: An update + (Giulio Tononi)
- The Use of Information Theory in Evolutionary Biology + (Christoph Adami)
- Information theory in molecular biology + (Christoph Adami)
- Digital genetics: Unravelling the genetic basis of evolution + (Christoph Adami)
- On the efficiency of path sampling methods for the calculation of free energies from non-equilibrium simulations + (Wolfgang Lechner)
- Optimum protocol for fast-switching free-energy calculations + (Philipp Geiger)
- Biased sampling of nonequilibrium trajectories: Can fast switching simulations outperform conventional free energy calculation methods? + (Harald Oberhofer)
- Efficient extraction of free energy profiles from nonequilibrium experiments + (Harald Oberhofer)
- An intermediate level of abstraction for computational systems chemistry + (Jakob L. Andersen)
- Maximizing output and recognizing autocatalysis in chemical reaction networks is NP-complete + (Jakob L. Andersen)
- Analyzing molecular reaction networks: From pathways to chemical organizations + (Christoph Kaleta)
- On universality in ageing ferromagnets + (Christophe Chatelain)
- Good practices in free-energy calculations + (Andrew Pohorille)
- An analytical solution to the kinetics of breakable filament assembly + (Christopher A. Waudby)
- On the connection between computational and biochemical measurement + (Thomas E Ouldridge)
- Thermodynamics of Computational Copying in Biochemical Systems + (Thomas E. Ouldridge)
- Energy dissipation and noise correlations in biochemical sensing + (Christopher C. Govern)
- Fundamental limits on sensing chemical concentrations with linear biochemical networks + (Christopher C. Govern)
- Thermodynamics of computational copying in biochemical systems + (Thomas E. Ouldridge)
- Growth processes in teeth distinguish modern humans from Homo erectus and earlier hominins + (Christopher Dean)
- Identification and classification of hubs in brain networks + (Olaf Sporns)
- Dynamical consequences of lesions in cortical networks + (Christopher J. Honey)
- Mapping the structural core of human cerebral cortex + (Patric Hagmann)
- Alternative splicing in the nervous system: An emerging source of diversity and regulation + (Christopher J. Lee)
- Comparison of far-from-equilibrium work relations + (Christopher Jarzynski)
- Rare events and the convergence of exponentially averaged work values + (Christopher Jarzynski)
- Path-integral analysis of fluctuation theorems for general Langevin processes + (Vladimir Y. Chernyak)
- Comparison of work fluctuation relations + (Jordan Horowitz)
- Escorted free energy simulations: Improving convergence by reducing dissipation + (Suriyanarayanan Vaikuntanathan)
- Lag inequality for birth-death processes with time-dependent rates + (Christopher Jarzynski)
- Maxwell's refrigerator: An exactly solvable model + (Dibyendu Mandal)
- Equalities and Inequalities: Irreversibility and the Second Law of Thermodynamics at the Nanoscale + (Christopher Jarzynski)
- Information processing and the second law of thermodynamics: An inclusive, Hamiltonian approach + (Sebastian Deffner)
- Modeling Maxwell's demon with a microcanonical Szilard engine + (Suriyanarayanan Vaikuntanathan)
- Fluctuation relations and coarse-graining + (Saar Rahav)
- Classical and quantum fluctuation theorems for heat exchange + (Christopher Jarzynski)
- Humans are not cooperative breeders but practice biocultural reproduction + (Barry Bogin)
- Distinguishing functional amino acid covariation from background linkage disequilibrium in HIV protease and reverse transcriptase + (Qi Wang)
- A Map of the Interactome Network of the Metazoan C. elegans + (Siming Li)
- New evidence for hominin carcass processing strategies at 1.5 Ma, Koobi Fora, Kenya + (Briana L. Pobiner)
- Histone H3 tail clipping regulates gene expression + (Helena Santos-Rosa)
- Pseudo-random generators for all hardnesses + (Christopher Umans)
- Unbalanced expanders and randomness extractors from parvaresh-vardy codes + (Venkatesan Guruswami)
- Beyond Feast-Famine: Brain evolution, human life history, and the metabolic syndrome + (Christopher W. Kuzawa)
- Metabolic correlates of hominid brain evolution + (William R. Leonard)
- Adipose tissue in human infancy and childhood: An evolutionary perspective + (Christopher W. Kuzawa)
- Optimization, approximation, and complexity classes + (Christos H. Papadimitriou)
- On the complexity of the parity argument and other inefficient proofs of existence + (Christos H. Papadimitriou)
- Games against nature + (Christos H. Papadimitriou)
- Schizophrenia, neuroimaging and connectomics + (Alex Fornito)
- Disrupted small-world networks in schizophrenia + (Yong Liu)
- Brain anatomical network and intelligence + (Yonghui Li)
- Asymmetric division of Drosophila male germline stem cell shows asymmetric histone distribution + (Vuong Tran)
- Nucleosome positioning and gene regulation: Advances through genomics + (Cizhong Jiang)
- Nucleosome organization in the Drosophila genome + (Travis N. Mavrich)
- Nucleosomes are well positioned in exons and carry characteristic histone modifications + (Robin Andersson)
- Regulation of chromatin structure by long noncoding RNAs: Focus on natural antisense transcripts + (Marco Magistri)
- On boolean decision trees with faulty nodes + (Claire Kenyon)
- The ManyBugs and IntroClass Benchmarks for Automated Repair of C Programs + (Claire Le Goues)
- Fluctuations of energy flux in a simple dissipative out-of-equilibrium system + (Claudio Falcón)
- Modelling the development of cortical systems networks + (Marcus Kaiser)
- Nonoptimal component placement, but short processing paths, due to long-distance projections in neural systems + (Marcus Kaiser)
- Organization, development and function of complex brain networks + (Olaf Sporns)
- Role of mechanical factors in the morphology of the primate cerebral cortex + (Claus C. Hilgetag)
- A simple rule for axon outgrowth and synaptic competition generates realistic connection lengths and filling fractions + (Marcus Kaiser)
- Modification of activity-dependent increases of cerebral blood flow by excitatory synaptic activity and spikes in rat cerebellar cortex + (Claus Mathiesen)
- Experimental accessibility of generalized fluctuation-dissipation relations for nonequilibrium steady states + (Jakob Mehl)
- Realization of a micrometre-sized stochastic heat engine + (Valentin Blickle)
- BPP and the polynomial hierarchy + (Clemens Lautemann)
- Solution of a 20-variable 3-SAT problem on a DNA computer + (Ravinderjit S. Braich)
- Differences in signalling by directly and indirectly binding ligands in bacterial chemotaxis + (Silke Neumann)
- Programming biomolecular self-assembly pathways + (Peng Yin)
- Quantum fluctuation relations: foundations and applications + (M Campisi)
- Effective temperatures in driven systems: Static versus time-dependent relations + (Corey S. O'Hern)
- Small-world properties of nonlinear brain activity in schizophrenia + (Mikail Rubinov)
- The neural basis of functional brain imaging signals + (David Attwell)
- Dynamics and memory of heterochromatin in living cells + (Nathaniel A. Hathaway)
- Experimental demonstration of a latch in clocked quantum-dot cellular automata + (Alexei O. Orlov)
- Maxwell's demon and quantum-dot cellular automata + (John Timler)
- Evidence for early life in Earth's oldest hydrothermal vent precipitates + (Matthew S. Dodd)
- Non-equilibrium steady states: Maximization of the Shannon entropy associated with the distribution of dynamical trajectories in the presence of constraints + (Cécile Monthus)
- Mechanics of Nonequilibrium Liquids 2nd edn + (D J Evans)
- Thermodynamics 3rd enlarged edn + (D Jou)
- Theory of Nonequilibrium Steady States + (D-Q Jiang)
- Single-photon detection by rod cells of the retina + (F. Rieke)
- Generating Binary Sequences for Stochastic Computing + (P. Jeavons)
- BMI peak in infancy as a predictor for later BMI in the Uppsala Family Study + (R. J. Silverwood)
- Extracting work from a single heat bath through feedback + (D. Abreu)
- Conformational spread in a ring of proteins: A stochastic approach to allostery + (T. A.J. Duke)
- Weight consistency specifies regularities of macaque cortical networks + (N. T. Markov)
- Generalised Einstein relation for hot Brownian motion + (D. Chakraborty)
- Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies + (D. Collin)
- Fluctuation theorem for a double quantum dot coupled to a point-contact electrometer + (D. Golubev)
- Stochastic thermodynamics of bipartite systems: Transfer entropy inequalities and a Maxwell's demon interpretation + (D. Hartich)
- Information-theoretic versus thermodynamic entropy production in autonomous sensory networks + (A. C. Barato)
- Generalization of the second law for a transition between nonequilibrium states + (K. Takara)
- Generalization of the second law for a nonequilibrium initial state + (H. H. Hasegawa)
- Laser cooling of atoms + (D. J. Wineland)
- The physics of molecular motors + (C. Bustamante)
- Principles of Population Genetics. + (R. M. Cormack)
- Nonequilibrium fluctuations and mechanochemical couplings of a molecular motor + (A. W.C. Lau)
- Fluctuation theorem for the flashing ratchet model of molecular motors + (D. Lacoste)
- Measurement of 'true' glucose production rates in infancy and childhood with 6,6-dideuteroglucose + (D. M. Bier)
- Fluctuations and irreversibility: An experimental demonstration of a second-law-like theorem using a colloidal particle held in an optical trap + (D. M. Carberry)
- Experimental study of the fluctuation theorem in a nonequilibrium steady state + (G. M. Wang)
- Entropy production and fluctuation relations for a KPZ interface + (A. C. Barato)
- Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins + (M. Lachner)
- Of dreaming and wakefulness + (R. R. Llinás)
- Universal features in the energetics of symmetry breaking + (É Roldán)
- On the Relation between Gradient Flows and the Large-Deviation Principle, with Applications to Markov Chains and Diffusion + (A. Mielke)
- The mesoscopic dynamics of thermodynamic systems + (D. Reguera)
- Bidirectional single-electron counting and the fluctuation theorem + (Y. Utsumi)
- Insect olfactory receptors. + (J. Boeckh)
- Self-regulating gene: An exact solution + (J. E.M. Hornos)
- On anomalous diffusion and the out of equilibrium response function in one-dimensional models + (D. Villamaina)
- Irreversible dynamics of a massive intruder in dense granular fluids + (A. Sarracino)
- Irreversible effects of memory + (A. Puglisi)
- A stochastic-based FPGA controller for an induction motor drive with integrated neural network algorithms + (Da Zhang)
- RAS oncogenes: Weaving a tumorigenic web + (Yuliya Pylayeva-Gupta)
- Functional brain networks develop from a "local to distributed" organization + (Damien A. Fair)
- Representations of Odor in the Piriform Cortex + (Dan D. Stettler)
- An effect of DNA sequence on nucleosome occupancy and removal + (Xin Wang)
- A simple population protocol for fast robust approximate majority + (Dana Angluin)
- Computation in networks of passively mobile finite-state sensors + (Dana Angluin)
- Fast computation by population protocols with a leader + (Dana Angluin)
- Sampling adsorbing staircase walks using a new Markov chain decomposition method + (Russell A. Martin)
- Mechanisms for the inheritance of chromatin states + (Danesh Moazed)
- Role of Astrocytes in Matching Blood Flow to Neuronal Activity + (Danica Jakovcevic)
- Stoichiometric network theory for nonequilibrium biochemical systems + (Hong Qian)
- Thermodynamic constraints for biochemical networks + (Daniel A. Beard)
- Thermodynamics of stoichiometric biochemical networks in living systems far from equilibrium + (Hong Qian)
- Fluctuation theorems for quantum processes + (Tameem Albash)
- Realm of validity of the Crooks relation + (Daniel Ben-Avraham)
- Methods for quantifying the informational structure of sensory and motor data + (Max Lungarella)
- Attractant- and Disulfide-Induced Conformational Changes in the Ligand Binding Domain of the Chemotaxis Aspartate Receptor: A 19F NMR Study + (Mark A. Danielson)
- Distributed hierarchical processing in the primate cerebral cortex + (Daniel J. Felleman)
- Free energy for protein folding from nonequilibrium simulations using the Jarzynski equality + (Daniel K. West)
- Efficient physical embedding of topologically complex information processing networks in brains and computer circuits + (Danielle S. Bassett)
- The brain's default network: Anatomy, function, and relevance to disease + (Randy L. Buckner)
- Bayesian integration in sensorimotor learning + (Konrad P. Körding)
- Theory of a Systematic Computational Error in Free Energy Differences + (Daniel M. Zuckerman)
- Single-ensemble nonequilibrium path-sampling estimates of free energy differences + (F. Marty Ytreberg)
- Intraglomerular inhibition: Signaling mechanisms of an olfactory microcircuit + (Gabe J. Murphy)
- Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMENTHYLASE3 + (Anders M. Lindroth)
- A rigorous derivation of the chemical master equation + (Daniel T. Gillespie)
- A general method for numerically simulating the stochastic time evolution of coupled chemical reactions + (Daniel T. Gillespie)
- Relationship between subsistence and age at weaning in "preindustrial" societies + (Daniel W. Sellen)
- The role of glial glutamate transporters in maintaining the independent operation of juvenile mouse cerebellar parallel fibre synapses + (Païkan Marcaggi)
- Gallavotti-Cohen-Type Symmetry Related to Cycle Decompositions for Markov Chains and Biochemical Applications + (Alessandra Faggionato)
- Human brain networks in health and disease + (Danielle S. Bassett)
- Small-world brain networks + (Danielle Smith Bassett)
- TrxG and PcG proteins but not methylated histones remain associated with DNA through replication + (Svetlana Petruk)
- A small world of neuronal synchrony + (Shan Yu)
- Asymmetrically modified nucleosomes + (Philipp Voigt)
- Chromatin structure and the inheritance of epigenetic information + (Raphaël Margueron)
- Role of the polycomb protein EED in the propagation of repressive histone marks + (Raphael Margueron)
- Emergent complex neural dynamics + (Dante R. Chialvo)
- Functional brain network efficiency predicts intelligence + (Nicolas Langer)
- Modular verification of chemical reaction network encodings via serializability analysis + (Matthew R. Lakin)
- Discriminatory proofreading regimes in nonequilibrium systems + (Arvind Murugan)
- Synthetic molecular motors and mechanical machines + (Euan R. Kay)
- Rapid Neocortical Dynamics: Cellular and Network Mechanisms + (Bilal Haider)
- Inhibitory postsynaptic potentials carry synchronized frequency information in active cortical networks + (Andrea Hasenstaub)