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Thermodynamics of Computation

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  1. 119th Statistical Mechanics Conference
  2. APS March Meeting 2019
  3. ARTICLE A Theory of Human Life History Evolution : Diet , Intelligence , and Longevity
  4. ATP-dependent mechanics of red blood cells
  5. ATP Consumption by Mammalian Rod Photoreceptors in Darkness and in Light
  6. A "fast growth" method of computing free energy differences
  7. A (sub)graph isomorphism algorithm for matching large graphs
  8. A 32-bit powerPC system-on-a-chip with support for dynamic voltage scaling and dynamic frequency scaling
  9. A 96 × 64 intelligent digital pixel array with extended binary stochastic arithmetic
  10. A C. elegans LSD1 Demethylase Contributes to Germline Immortality by Reprogramming Epigenetic Memory
  11. A Cost / Speed / Reliability Trade-off in Erasing a Bit
  12. A DNA-fuelled molecular machine made of DNA
  13. A Gallavotti-Cohen-Evans-Morriss Like Symmetry for a Class of Markov Jump Processes
  14. A Gallavotti Cohen-Type Symmetry in the Large Deviation Functional for Stochastic Dynamics
  15. A Hitchhiker's guide to statistical tests for assessing randomized algorithms in software engineering
  16. A Kilobit Special Number Field Sieve Factorization
  17. A Map of the Interactome Network of the Metazoan C. elegans
  18. A Nonequilibrium Extension of the Clausius Heat Theorem
  19. A Note on Bennett’s Time-Space Tradeoff for Reversible Computation
  20. A Parallel Repetition Theorem
  21. A Relaxed Min-Sum LDPC Decoder With Simplified Check Nodes
  22. A Resilient, Low-Frequency, Small-World Human Brain Functional Network with Highly Connected Association Cortical Hubs
  23. A Sampling of the Yeast Proteome
  24. A Simple Histone Code Opens Many Paths to Epigenetics
  25. A Simple Model of Optimal Population Coding for Sensory Systems
  26. A Survey of Techniques for Approximate Computing
  27. A bound particle coupled to two thermostats
  28. A complete problem for statistical zero knowledge
  29. A complexity measure for selective matching of signals by the brain
  30. A complexity theoretic approach to randomness
  31. A cost/speed/reliability tradeoff to erasing
  32. A fast and elitist multiobjective genetic algorithm: NSGA-II
  33. A fast quantum mechanical algorithm for database search
  34. A field-theoretic approach to non-equilibrium work identities
  35. A fluctuation theorem for currents and non-linear response coefficients
  36. A fluctuation theorem for non-equilibrium relaxational systems driven by external forces
  37. A general framework for non-equilibrium phenomena: The master equation and its formal consequences
  38. A general method for numerically simulating the stochastic time evolution of coupled chemical reactions
  39. A general model for ontogenetic growth
  40. A general model for the origin of allometric scaling laws in biology
  41. A general model for the structure and allometry of plant vascular systems
  42. A general purpose RNA-cleaving DNA enzyme
  43. A generalization of Wegscheider's condition. Implications for properties of steady states and for quasi-steady-state approximation
  44. A generalized integral fluctuation theorem for general jump processes
  45. A graph-theoretical approach for the analysis and model reduction of complex-balanced chemical reaction networks
  46. A histone mutant reproduces the phenotype caused by loss of histone-modifying factor polycomb
  47. A master equation description of local fluctuations
  48. A mathematical theorem as the basis for the second law: Thomson's formulation applied to equilibrium
  49. A mathematical theory of communication
  50. A measure for brain complexity: relating functional segregation and integration in the nervous system.
  51. A method for measuring cerebral glucose metabolism in vivo by 13C-NMR spectroscopy
  52. A model for transmission of the H3K27me3 epigenetic mark
  53. A modular gradient-sensing network for chemotaxis in Escherichia coli revealed by responses to time-varying stimuli
  54. A molecular information ratchet
  55. A multidimensional filter algorithm for nonlinear equations and nonlinear least-squares
  56. A new notation for quantum mechanics
  57. A new polynomial-time algorithm for linear programming
  58. A note on monte carlo primality tests and algorithmic information theory
  59. A note on the Jarzynski equality
  60. A polynomial-time approximation algorithm for the permanent of a matrix with nonnegative entries
  61. A possible classification of nonequilibrium steady states
  62. A quantitative analysis of sniffing strategies in rats performing odor detection tasks
  63. A quantitative comparison of sRNA-based and protein-based gene regulation
  64. A quantitative estimation of the global translational activity in logarithmically growing yeast cells
  65. A reconfigurable stochastic architecture for highly reliable computing
  66. A rigorous derivation of the chemical master equation
  67. A selective control of olfactory bulb electrical activity in relation to food deprivation and satiety in rats.
  68. A simple coding procedure enhances a neuron’s information capacity
  69. A simple population protocol for fast robust approximate majority
  70. A simple rule for axon outgrowth and synaptic competition generates realistic connection lengths and filling fractions
  71. A simple theory of motor protein kinetics and energetics. II
  72. A small world of neuronal synchrony
  73. A spectral transform approach to stochastic circuits
  74. A stochastic-based FPGA controller for an induction motor drive with integrated neural network algorithms
  75. A stochastic reconfigurable architecture for fault-tolerant computation with sequential logic
  76. A synthetic oscillatory network of transcriptional regulators
  77. A systems perspective on early olfactory coding
  78. A temperature-extended Jarzynski relation: Application to the numerical calculation of surface tension
  79. A tension-based theory of morphogenesis and compact wiring in the central nervous system
  80. A test of metabolically efficient coding in the retina
  81. A theory of the learnable
  82. A universal scaling law between gray matter and white matter of cerebral cortex.
  83. A yeast protein similar to bacterial two-component regulators.
  84. Aberrant frontal and temporal complex network structure in schizophrenia: a graph theoretical analysis
  85. Abnormal cortical networks in mild cognitive impairment and Alzheimer's disease
  86. Accuracy of direct gradient sensing by cell-surface receptors
  87. Active membrane fluctuations studied by micropipet aspiration
  88. Adapt locally and act globally: Strategy to maintain high chemoreceptor sensitivity in complex environments
  89. Addressing the wicked problem of quality in higher education: theoretical approaches and implications
  90. Adipose tissue in human infancy and childhood: An evolutionary perspective
  91. Advocating noise as an agent for ultra-low energy computing: Probabilistic complementary metal-oxide-semiconductor devices and their characteristics
  92. Aerobic Glycolysis: Meeting the Metabolic Requirements of Cell Proliferation
  93. Aerobic glycolysis in the human brain is associated with development and neotenous gene expression
  94. Aerobic glycolysis in the primate brain: Reconsidering the implications for growth and maintenance
  95. Age-related alterations in the modular organization of structural cortical network by using cortical thickness from MRI
  96. Age-related changes in modular organization of human brain functional networks
  97. Alec Boyd
  98. Algebraic methods in the theory of lower bounds for Boolean circuit complexity
  99. Algorithmic Self-Assembly of DNA Sierpinski Triangles
  100. Algorithmic randomness and physical entropy
  101. Alternative splicing in the nervous system: An emerging source of diversity and regulation
  102. Amorphous computing
  103. Amplification and adaptation in regulatory and sensory systems
  104. An Energy Budget for Signaling in the Grey Matter of the Brain
  105. An Energy Budget for the Olfactory Glomerulus
  106. An Example of a Mechanical System whose Ensemble Average Energy, Starting with a Microcanonical Ensemble, Decreases after an Operation
  107. An Introduction to Kolmogorov Complexity and Its Applications
  108. An O(log n log log n) Space Algorithm for Undirected st-connectivity
  109. An amplified sensitivity arising from covalent modification in biological systems.
  110. An analog of the Boltzmann H-theorem (a Liapunov function) for systems of coupled chemical reactions
  111. An analysis of selected computer interchange color spaces
  112. An analytical solution to the kinetics of breakable filament assembly
  113. An architecture for fault-tolerant computation with stochastic logic
  114. An effect of DNA sequence on nucleosome occupancy and removal
  115. An efficient 10GBASE-T ethernet LDPC decoder design with low error floors
  116. An efficient graph theory based method to identify every minimal reaction set in a metabolic network
  117. An estimate of the total DNA in the biosphere
  118. An examination of the role of autocatalytic cycles in the chemistry of proposed primordial reactions
  119. An experimental test of the Jarzynski equality in a mechanical experiment
  120. An information-theoretic equality implying the Jarzynski relation
  121. An information integration theory of consciousness
  122. An information theoretical analysis of kinase activated phosphorylation dephosphorylation cycle
  123. An informational process based on reversible universal cellular automata
  124. An introduction to population protocols
  125. An introduction to thermodynamics and statistical mechanics
  126. An update on the nonequilibrium linear response
  127. Analog Computation by DNA Strand Displacement Circuits
  128. Analog Versus Digital: Extrapolating from Electronics to Neurobiology
  129. Analog synthetic biology
  130. Analysis of precision for scaling the intermediate variables in fixed-point arithmetic circuits
  131. Analyzing friction forces with the Jarzynski equality
  132. Analyzing molecular reaction networks: From pathways to chemical organizations
  133. Andre Barato
  134. Andy Adamatzky
  135. Another proof of Gell-Mann and Low's theorem
  136. Application-level correctness and its impact on fault tolerance
  137. Application of Boolean Algebra to Switching Circuit Design and to Error Detection
  138. Application of importance sampling to the computation of large deviations in nonequilibrium processes
  139. ApproxMA: Approximate Memory Access for Dynamic Precision Scaling
  140. Approximate computing: An emerging paradigm for energy-efficient design
  141. Approximate counting, uniform generation and rapidly mixing Markov chains
  142. Architecture and Statistical Model of a Pulse-Mode Digital Multilayer Neural Network
  143. Are Recursion Theoretic Arguments Useful in Complexity Theory?
  144. Argonaute proteins couple chromatin silencing to alternative splicing
  145. Artemy Kolchinsky
  146. Article for analog vector algebra computation
  147. Assessing the nonequilibrium thermodynamics in a quenched quantum many-body system via single projective measurements
  148. Astrocytes Couple Synaptic Activity to Glucose Utilization in the Brain.
  149. Asymmetric division of Drosophila male germline stem cell shows asymmetric histone distribution
  150. Asymmetrically modified nucleosomes
  151. Asymptotically Zero Energy Computing Split-Level Charge Recovery Logic
  152. Asymptotics of work distributions in nonequilibrium systems
  153. Asynchronous computation with molecular reactions
  154. Attractant- and Disulfide-Induced Conformational Changes in the Ligand Binding Domain of the Chemotaxis Aspartate Receptor: A 19F NMR Study
  155. Average Case Complete Problems
  156. Avinash Lingamneni
  157. Aviv Bergman
  158. Axis-dependent anisotropy in protein unfolding from integrated nonequilibrium single-molecule experiments, analysis, and simulation
  159. BMI peak in infancy as a predictor for later BMI in the Uppsala Family Study
  160. BPP and the polynomial hierarchy
  161. BRAIN WORK AND BRAIN IMAGING
  162. Bacterial chemoreceptors: high-performance signaling in networked arrays
  163. Bacterial computing with engineered populations
  164. Barriers and silencers: A theoretical toolkit for control and containment of nucleosome-based epigenetic states
  165. Basal Metabolic Rate in Man
  166. Bayesian integration in sensorimotor learning
  167. Beilstein Bozen Symposium
  168. Benjamin Machta
  169. Best-effort computing: Re-thinking parallel software and hardware
  170. Beyond Feast-Famine: Brain evolution, human life history, and the metabolic syndrome
  171. Bias and error in estimates of equilibrium free-energy differences from nonequilibrium measurements
  172. Biased sampling of nonequilibrium trajectories: Can fast switching simulations outperform conventional free energy calculation methods?
  173. Bidirectional single-electron counting and the fluctuation theorem
  174. Binary Multiplication with PN Sequences
  175. Binding of the Escherichia coli response regulator CheY to its target measured in vivo by fluorescence resonance energy transfer.
  176. Binocular disparity can explain the orientation of ocular dominance stripes in primate primary visual area (V1)
  177. Biochemical and pharmacological control of the multiplicity of coupling at G-protein-coupled receptors
  178. Biological solutions to transport network design
  179. Biomolecules under mechanical force
  180. Biorthogonal quantum mechanics
  181. Blake Pollard
  182. Body Composition and Energy Needs during Growth
  183. Body size and metabolic rate.
  184. Bona fide stochastic resonance: A view point from stochastic energetics
  185. Boundary layers in stochastic thermodynamics
  186. Bounds of efficiency at maximum power for linear, superlinear and sublinear irreversible Carnot-like heat engines
  187. Brain Graphs: Graphical Models of the Human Brain Connectome
  188. Brain anatomical network and intelligence
  189. Brain and body oxygen requirements of Gnathonemus petersii, a fish with an exceptionally large brain
  190. Brain growth, life history, and cognition in primate and human evolution
  191. Breaking DES Using a Molecular Computer
  192. Broadband Criticality of Human Brain Network Synchronization
  193. Broken symmetries and the masses of gauge bosons
  194. Brownian motion: A paradigm of soft matter and biological physics
  195. Brownian motors: Noisy transport far from equilibrium
  196. Bruno Loff
  197. Buckling, stiffening, and negative dissipation in the dynamics of a biopolymer in an active medium
  198. Building programmable jigsaw puzzles with RNA
  199. CNS energy metabolism as related to function
  200. CREW PRAMs and Decision Trees
  201. CURRENT OPINION IN STRUCTURAL BIOLOGY
  202. Calcium, the two-faced messenger of olfactory transduction and adaptation
  203. Calcium signalling and regulation in olfactory neurons
  204. Calculating potentials of mean force and diffusion coefficients from nonequilibrium processes without Jarzynski's equality
  205. Calculating potentials of mean force from steered molecular dynamics simulations.
  206. Calculating source line level energy information for Android applications
  207. Cancer as a dysregulated epigenome allowing cellular growth advantage at the expense of the host
  208. Carl T. Bergstrom
  209. Carlton M. Caves
  210. Cell Type-Specific Tuning of Hippocampal Interneuron Firing during Gamma Oscillations In Vivo
  211. Cellular energy utilization and molecular origin of standard metabolic rate in mammals
  212. Cellular stoichiometry of the components of the chemotaxis signaling complex
  213. Central role of Drosophila SU(VAR)3-9 in histone H3-K9 methylation and heterochromatic gene silencing
  214. Cerebellar Golgi cells in the rat: Receptive fields and timing of responses to facial stimulation
  215. Cerebellar LTD and Pattern Recognition by Purkinje Cells
  216. ChIP-seq analysis reveals distinct H3K27me3 profiles that correlate with transcriptional activity
  217. Challenges for complexity measures: A perspective from social dynamics and collective social computation
  218. Changes in brain weights during the span of human life: Relation of brain weights to body heights and body weights
  219. Channel noise in neurons
  220. Characterization of Minimum Error Linear Coding with Sensory and Neural Noise
  221. Characterization of the RNA content of chromatin
  222. Characterization of the anterior cingulate's role in the at-risk mental state using graph theory
  223. Characterizing plastic depinning dynamics with the fluctuation theorem
  224. Chemical Paleogenetics. Molecular "Restoration Studies" of Extinct Forms of Life.
  225. Chemical Reaction Networks for Computing Polynomials
  226. Chemical and mechanical efficiencies of molecular motors and implications for motor mechanisms
  227. Chemical implementation of finite-state machines
  228. Chemical implementation of neural networks and Turing machines
  229. Chemical kinetics is turing universal
  230. Chemical reaction network theory for in-silico biologists
  231. Chemical sensing by nonequilibrium cooperative receptors
  232. Chemomechanical coupling of molecular motors: Thermodynamics, network representations, and balance conditions
  233. Chemotaxis in Escherichia coli analysed by three-dimensional tracking
  234. Childhood and the evolution of the human life course: An Introduction
  235. Christian van den Broeck
  236. Chromatin Remodeling around Nucleosome-Free Regions Leads to Repression of Noncoding RNA Transcription
  237. Chromatin and epigenetic regulation of pre-mrna processing
  238. Chromatin computation
  239. Chromatin organization marks exon-intron structure
  240. Chromatin proteins: Key responders to stress
  241. Chromatin structure and the inheritance of epigenetic information
  242. Circulation and Energy Metabolism of the Brain.
  243. Classical Langevin dynamics of a charged particle moving on a sphere and diamagnetism: A surprise
  244. Classical and quantum fluctuation theorems for heat exchange
  245. Classical and quantum limitations on energy consumption in computation
  246. Classical open systems with nonlinear nonlocal dissipation and state-dependent diffusion: Dynamical responses and the Jarzynski equality
  247. Clinical longitudinal standards for height, weight, height velocity, weight velocity, and stages of puberty
  248. Closed-loop control strategy with improved current for a flashing ratchet
  249. Coding Efficiency and the Metabolic Cost of Sensory and Neural Information
  250. Coding of Odors by a Receptor Repertoire
  251. Cognitive Computing - Merging Concepts with Hardware
  252. Cognitive Effort Drives Workspace Configuration of Human Brain Functional Networks
  253. Cognitive fitness of cost-efficient brain functional networks
  254. Collective dynamics of 'small-world' networks
  255. Colloquium: The physics of Maxwell's demon and information
  256. Combinatorial Problems and Exercises
  257. Combinatorial complexity in chromatin structure and function: Revisiting the histone code
  258. Combinatorial complexity of pathway analysis in metabolic networks.
  259. Combinatorial displacement of DNA strands: Application to matrix multiplication and weighted sums
  260. Combinatorial readout of dual histone modifications by paired chromatin-associated modules
  261. Combined analog and action potential coding in hippocampal mossy fibers
  262. Comment on "Failure of the work-Hamiltonian connection for free-energy calculations" by Jose M. G. Vilar and J. Miguel Rubi
  263. Communication in neuronal networks
  264. Communication lower bounds using directional derivatives
  265. Communications: Can one identify nonequilibrium in a three-state system by analyzing two-state trajectories?
  266. Comparison between molecular dynamics simulations and the Smoluchowski theory of reactions in a hard-sphere liquid
  267. Comparison of a hair bundle's spontaneous oscillations with its response to mechanical stimulation reveals the underlying active process
  268. Comparison of far-from-equilibrium work relations
  269. Comparison of work fluctuation relations
  270. Compartmental organization of the olfactory bulb glomerulus
  271. Compendium of the Foundations of Classical Statistical Physics
  272. Compiler optimization on instruction scheduling for low power
  273. Complex Extension of Quantum Mechanics
  274. Complex and detailed balancing of chemical reaction networks revisited
  275. Complex brain networks: graph theoretical analysis of structural and functional systems
  276. Complex network measures of brain connectivity: Uses and interpretations
  277. Complex parameter landscape for a complex neuron model
  278. Complexity, entropy and the physics of information
  279. Component-placement optimization in the brain
  280. Computation in networks of passively mobile finite-state sensors
  281. Computation on stochastic bit streams digital image processing case studies
  282. Computation with finite stochastic chemical reaction networks
  283. Computational Complexity: A Modern Approach
  284. Computational Complexity of Probabilistic Turing Machines
  285. Computational complexity: a modern approach
  286. Computational design and experimental validation of oligonucleotide-sensing allosteric ribozymes
  287. Computational design of nucleic acid feedback control circuits
  288. Computational limits to binary genes.
  289. Computational selection of nucleic acid biosensors via a slip structure model
  290. Computed tomography-estimated specific gravity of noncontused brain areas as a marker of severity in human traumatic brain injury
  291. Computer simulation of Feynman's ratchet and pawl system
  292. Computers and Intractability: a guide to NP-completeness
  293. Computing the optimal protocol for finite-time processes in stochastic thermodynamics
  294. Computing with Noisy Information
  295. Conformational spread in a ring of proteins: A stochastic approach to allostery
  296. Connectivity-driven white matter scaling and folding in primate cerebral cortex
  297. Connectivity optimization and the positioning of cortical areas
  298. Consciousness as integrated information: A provisional manifesto
  299. Consensus paper: The cerebellum's role in movement and cognition
  300. Conservative logic
  301. Constrained maximal power in small engines
  302. Construction and optimization of a quantum analog of the Carnot cycle
  303. Construction of an in vitro bistable circuit from synthetic transcriptional switches
  304. Continuous time controllers using digital programmable devices
  305. Control of DNA strand displacement kinetics using toehold exchange
  306. Convergence in the olfactory system: quantitative aspects of odour sensitivity
  307. Cooling classical particles with a microcanonical szilard engine
  308. Cooperative binding of effectors by an allosteric ribozyme.
  309. Cooperative binding of two acetylation marks on a histone tail by a single bromodomain
  310. Cooperative multicomponent self-assembly of nucleic acid structures for the activation of DNAzyme cascades: A paradigm for DNA sensors and aptasensors
  311. Cooperativity, sensitivity, and noise in biochemical signaling
  312. Coordination languages and their significance
  313. Correcting errors beyond the Guruswami-Sudan radius in polynomial time
  314. Correlated evolution of nearby residues in drosophilid proteins
  315. Correlated morphometric and biochemical studies on the liver cell. I. Morphometric model, stereologic methods, and normal morphometric data for rat liver.
  316. Correlations Among Amino Acid Sites in bHLH Protein Domains: An Information Theoretic Analysis
  317. Cortical GABA Interneurons in Neurovascular Coupling: Relays for Subcortical Vasoactive Pathways
  318. Cortical Hubs Revealed by Intrinsic Functional Connectivity: Mapping, Assessment of Stability, and Relation to Alzheimer's Disease
  319. Cosmological experiments in superfluid helium?
  320. Costs of encephalization: the energy trade-off hypothesis tested on birds
  321. Could information theory provide an ecological theory of sensory processing?
  322. Counting translocations of strongly repelling particles through single channels: Fluctuation theorem for membrane transport
  323. Covalent modifications of histones during mitosis and meiosis
  324. Covariation of mutations in the V3 loop of human immunodeficiency virus type 1 envelope protein: an information theoretic analysis.
  325. Covariation of residues in the homeodomain sequence family
  326. Criticism of Feynman’s analysis of the ratchet as an engine
  327. Crowding Effects on Diffusion in Solutions and Cells
  328. Cryptographic Limitations on Learning Boolean Formulae and Finite Automata
  329. Cube v4: From performance report explorer to performance analysis tool
  330. Curie's principle
  331. Current, maximum power and optimized efficiency of a Brownian heat engine
  332. Current trends in finite-time thermodynamics
  333. Cybernetics : Control and Communication in the Animal and the Machine --2nd. ed
  334. DNA COMPUTING
  335. DNA as a universal substrate for chemical kinetics (Extended Abstract)
  336. Darwinian demons, evolutionary complexity, and information maximization
  337. Data Center Efficiency Assessment
  338. David Krakauer
  339. David Sivak
  340. Decoherence, einselection, and the quantum origins of the classical
  341. Defect and error tolerance in the presence of massive numbers of defects
  342. Defining Network Topologies that Can Achieve Biochemical Adaptation
  343. Delayed stochastic decoding of LDPC codes
  344. Demons, Engines and the Second Law
  345. Dendrosomatic voltage and charge transfer in rat neocortical pyramidal cells
  346. Density-dependent analysis of nonequilibrium paths improves free energy estimates II. A Feynman-Kac formalism
  347. Dental and skeletal growth in early fossil hominins
  348. Dental evidence for ontogenetic differences between modern humans and Neanderthals
  349. Deoxyribozymes that recode sequence information
  350. Dependence of the fluctuation-Dissipation temperature on the choice of observable
  351. Derandomizing polynomial identity tests means proving circuit lower bounds
  352. Derivation of quantum master equation with counting fields by monitoring a probe
  353. Design and analysis of synthetic carbon fixation pathways.
  354. Design of 1-tape 2-symbol reversible Turing machines based on reversible logic elements
  355. Design of a Neuronal Array
  356. Design of a trichromatic cone array
  357. Design principles of a bacterial signalling network
  358. Designing logic circuits for probabilistic computation in the presence of noise
  359. Designing optimal discrete-feedback thermodynamic engines
  360. Detecting Activity in Olfactory Bulb Glomeruli with Astrocyte Recording
  361. Determination of the nuclear magnetic resonance solution structure of an Antennapedia homeodomain-DNA complex
  362. Determining cortical landscapes
  363. Deterministic Function Computation with Chemical Reaction Network
  364. Deterministic function computation with chemical reaction networks
  365. Development of Gap Junctions in Hippocampal Astrocytes: Evidence That Whole Cell Electrophysiological Phenotype Is an Intrinsic Property of the Individual Cell
  366. Development of large-scale functional brain networks in children
  367. Dietary constraints on encephalization in primates
  368. Differences in signalling by directly and indirectly binding ligands in bacterial chemotaxis
  369. Differential Landauer's principle
  370. Diffusion Tensor Tractography Reveals Abnormal Topological Organization in Structural Cortical Networks in Alzheimer's Disease
  371. Digital and analog gene circuits for biotechnology
  372. Digital genetics: Unravelling the genetic basis of evolution
  373. Digitalized Signatures and Public-Key Functions as Intractable as Factorization
  374. Directing reprogramming to pluripotency by transcription factors
  375. Discovery and Characterization of Chromatin States for Systematic Annotation of the Human Genome
  376. Discriminatory proofreading regimes in nonequilibrium systems
  377. Disjointness is hard in the multiparty number-on-the-forehead model
  378. Disrupted Modularity and Local Connectivity of Brain Functional Networks in Childhood-Onset Schizophrenia
  379. Disrupted axonal fiber connectivity in schizophrenia
  380. Disrupted small-world networks in schizophrenia
  381. Dissipation-error tradeoff in proofreading
  382. Dissipation Bound for Thermodynamic Control
  383. Dissipation and lag in irreversible processes
  384. Dissipation and noise immunity in computation and communication
  385. Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
  386. Distinctive features of dinoflagellate chromatin. Absence of nucleosomes in a primitive species Prorocentrum micans E.
  387. Distinguishing functional amino acid covariation from background linkage disequilibrium in HIV protease and reverse transcriptase
  388. Distributed hierarchical processing in the primate cerebral cortex
  389. Distribution of astroglia in glomeruli of the rat main olfactory bulb: Exclusion from the sensory subcompartment of neuropil
  390. Distribution of entropy production for a colloidal particle in a nonequilibrium steady state
  391. Distribution of oxygen tension on the surface of arterioles, capillaries and venules of brain cortex and in tissue in normoxia: An experimental study on rats
  392. Distribution of work in isothermal nonequilibrium processes
  393. Diversity in the dynamical behaviour of a compartmentalized programmable biochemical oscillator
  394. Does replication‐induced transcription regulate synthesis of the myriad low copy number proteins of Escherichia coli?
  395. Dorit Aharonov
  396. Dropbox Quick Start
  397. Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMENTHYLASE3
  398. Dynamic DNA nanotechnology using strand-displacement reactions
  399. Dynamic force spectroscopy of DNA hairpins: I. Force kinetics and free energy landscapes
  400. Dynamic force spectroscopy of DNA hairpins: II. Irreversibility and dissipation
  401. Dynamic mapping at the laminar level of odor-elicited responses in rat olfactory bulb by functional MRI.
  402. Dynamic reconfiguration of human brain networks during learning
  403. Dynamical consequences of lesions in cortical networks
  404. Dynamical ensembles in nonequilibrium statistical mechanics
  405. Dynamical fluctuations for periodically driven diffusions
  406. Dynamical reconnection and stability constraints on cortical network architecture
  407. Dynamics and memory of heterochromatin in living cells
  408. Dynamics of a tracer granular particle as a nonequilibrium Markov process
  409. Dynamics of adaptation and diversification: a 10,000-generation experiment with bacterial populations.
  410. Dynamics of cooperativity in chemical sensing among cell-surface receptors
  411. Dynamics of inherently bounded histone modification domains
  412. Dynamics of market correlations: Taxonomy and portfolio analysis
  413. Dynamo: Amazon’s Highly Available Key-value Store
  414. ERSA: Error resilient system architecture for probabilistic applications
  415. Earliest evidence of modern human life history in North African early Homo sapiens.
  416. Early metazoan life: divergence, environment and ecology
  417. Earth mover's distance as a metric for image retrieval
  418. Easiness Assumptions and Hardness Tests: Trading Time for Zero Error
  419. Ecology, the Ascendent Perspective
  420. Ecology and Energetics of Encephalization in Hominid Evolution
  421. Edith Cohen
  422. Effect of ligand diffusion on occupancy fluctuations of cell-surface receptors
  423. Effective confinement as origin of the equivalence of kinetic temperature and fluctuation-dissipation ratio in a dense shear-driven suspension
  424. Effective temperature of active matter
  425. Effective temperature of red-blood-cell membrane fluctuations
  426. Effective temperatures in driven systems: Static versus time-dependent relations
  427. Effective temperatures of a driven, strongly anisotropic Brownian system
  428. Effective temperatures of a heated Brownian particle
  429. Effects of reservoir squeezing on quantum systems and work extraction
  430. Efficiencies of a molecular motor: a generic hybrid model applied to the F1-ATPase
  431. Efficiency and cost of economical brain functional networks
  432. Efficiency and fluctuation in tight-coupling model of molecular motor
  433. Efficiency at Maximal Power of Minimal Nonlinear Irreversible Heat Engines
  434. Efficiency at maximum power of Feynman's ratchet as a heat engine
  435. Efficiency at maximum power of thermally coupled heat engines
  436. Efficiency at maximum power output of linear irreversible Carnot-like heat engines
  437. Efficiency of Brownian motors in terms of entropy production rate
  438. Efficiency of a Carnot engine at maximum power output
  439. Efficiency of autonomous soft nanomachines at maximum power
  440. Efficiency of cellular information processing
  441. Efficiency of free energy transduction in autonomous systems
  442. Efficiency of functional brain networks and intellectual performance.
  443. Efficiency of information transmission by retinal ganglion cells
  444. Efficiency of molecular machines with continuous phase space
  445. Efficient behavior of small-world networks
  446. Efficient checking of computations
  447. Efficient extraction of free energy profiles from nonequilibrium experiments
  448. Efficient measurement of linear susceptibilities in molecular simulations: Application to aging supercooled liquids
  449. Efficient physical embedding of topologically complex information processing networks in brains and computer circuits
  450. Efficient randomized pattern-matching algorithms
  451. Efficient turing-universal computation with DNA polymers
  452. Electromagnetic gauge-freedom and work
  453. Electrophysiological and Morphological Amygdaloid Neurons in vitro Properties of Rat Basolateral
  454. Electrophysiological classes of cat primary visual cortical neurons in vivo as revealed by quantitative analyses.
  455. Electrophysiological properties of rat lateral parabrachial neurons in vitro
  456. Electrophysiology of interneurons in the glomerular layer of the rat olfactory bulb.
  457. Elements of Information Theory
  458. Elements of Information Theory 2nd Edition
  459. Emergent complex neural dynamics
  460. Encoding and Error-Correction Procedures for the Bose-Chaudhuri Codes
  461. End of Moore's law: Thermal (noise) death of integration in micro and nano electronics
  462. Energetic basis of brain activity: Implications for neuroimaging
  463. Energetic demand of multiple dependents and the evolution of slow human growth
  464. Energetics and performance of a microscopic heat engine based on exact calculations of work and heat distributions
  465. Energetics and the Evolution of the Genus Homo
  466. Energetics and the evolution of human brain size
  467. Energetics of functional activation in neural tissues
  468. Energy-Efficient Information Transfer by Visual Pathway Synapses
  469. Energy-Efficient Sensing with the Low Power, Energy Aware Processing (LEAP) Architecture
  470. Energy-efficient action potentials in hippocampal mossy fibers.
  471. Energy-efficient neuronal computation via quantal synaptic failures.
  472. Energy Aware Computing Through Probabilistic Switching: A Study of Limits
  473. Energy Balance for Analysis of Complex Metabolic Networks
  474. Energy Cost of Proofreading to Increase Fidelity of Transfer Ribonucleic Acid Aminoacylation
  475. Energy Efficient Neural Codes
  476. Energy allocation between brain and body during ontogenetic development
  477. Energy as a constraint on the coding and processing of sensory information
  478. Energy aware computing through probabilistic switching: A study of limits
  479. Energy balance for analysis of complex metabolic networks.
  480. Energy conversion by molecular motors coupled to nucleotide hydrolysis
  481. Energy dissipation and violation of the fluctuation-response relation in nonequilibrium Langevin systems
  482. Energy dissipation in an adaptive molecular circuit
  483. Energy efficient neural codes.
  484. Energy flow, partial equilibration, and effective temperatures in systems with slow dynamics
  485. Energy flows in low-entropy complex systems
  486. Energy limitation as a selective pressure on the evolution of sensory systems
  487. Energy metabolism of rabbit retina as related to function: high cost of Na+ transport.
  488. Energy representation for nonequilibrium Brownian-like systems: Steady states and fluctuation relations
  489. Energy transduction of isothermal ratchets: Generic aspects and specific examples close to and far from equilibrium
  490. Energy use constrains brain information processing
  491. Engineering aspects of enzymatic signal transduction: Photoreceptors in the retina
  492. Engineering complex riboswitch regulation by dual genetic selection
  493. Engineering precision RNA molecular switches
  494. Enhancing server availability and security through failure-oblivious computing
  495. Enstrophy dissipation in two-dimensional turbulence
  496. Entropic tension in crowded membranes
  497. Entropy-based characterizations of the observable dependence of the fluctuation-dissipation temperature
  498. Entropy 2018
  499. Entropy Production in Nonequilibrium Systems at Stationary States
  500. Entropy Production of Brownian Macromolecules with Inertia

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