Santa Fe Institute Collaboration Platform

COMPLEX TIME: Adaptation, Aging, & Arrow of Time

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Contact: Caitlin Lorraine McShea, Program Manager, cmcshea@santafe.edu

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  1. Aging and Adaptation in Infectious Diseases III/Session III: Disease History, Aging, and Complex Time
  2. Aging and Adaptation in Infectious Diseases III/Welcome, Introductions and Workshop Overview
  3. Aging and measures of processing speed
  4. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/A time to sleep and a time to die
  5. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/About time: Precision measurements and emergent simplicities in an individual bacterial cell's stochastic aging dynamics.
  6. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/All creatures fast and slow: senescence and longevity across the tree of life
  7. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Bree Aldridge
  8. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Day 1 Continental Breakfast (outside SFI Collins Conference Room)
  9. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Discussion
  10. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/JacopoGrilli
  11. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/LinChao
  12. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/MartinPicard
  13. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/MatteoOsella
  14. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/More questions than answers: relations between quantittative physiology and aging in E. coli
  15. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Overview of the meeting
  16. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Owen Jones
  17. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/SabrinaSpencer
  18. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/SrividyaIyer-Biswas
  19. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Stochastic processes shape senescence, beyond genes, and environment
  20. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Stochasticity, immortality, and mortality in E. coli
  21. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Systematic Physiology and Aging Across Diverse Organisms
  22. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/The long and the short of it: mycobacterial aging, asymmetry, and stress tolerance
  23. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Time perception and the rate of cellular aging outside the human body: an energetic perspective
  24. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Toward a Molecular Understanding of Quiescence versus Senescence
  25. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/UliSteiner
  26. Aging in complex interdependency networks
  27. Amplification or suppression: Social networks and the climate change-migration association in rural Mexico
  28. An exploration of the temporal dynamics
  29. An opposite role for tau in circadian rhythms revealed by mathematical modeling
  30. Antidepressant suppression of non-REM sleep spindles and REM sleep impairs hippocampus-dependent learning while augmenting striatum-dependent learning
  31. Are There too Many Farms in the World? Labor-Market Transaction Costs, Machine Capacities and Optimal Farm Size
  32. Are individual differences in sleep and circadian timing amplified by use of artificial light sources?
  33. Asking the Right Questions in Alzheimer’s Research
  34. Available energy fluxes drive a transition in the diversity, stability, and functional structure of microbial communities
  35. Brain computer interface
  36. CD4 memory T cell levels predict life span in genetically heterogeneous mice.
  37. Chesapeake requiem
  38. Cholinergic modulation of cognitive processing: Insights drawn from computational models
  39. Choosing Prediction Over Explanation in Psychology: Lessons From Machine Learning
  40. Circadian pacemaker interferes with sleep onset at specific times each day: Role in insomnia
  41. Circadian phenotype impacts the brain's resting-state functional connectivity, attentional performance, and sleepiness
  42. Circadian regulation dominates homeostatic control of sleep length and prior wake length in humans
  43. Circadian temperature and melatonin rhythms, sleep, and neurobehavioral function in humans living on a 20-h day
  44. Climate shocks and rural-urban migration in Mexico: exploring nonlinearities and thresholds
  45. Climate shocks and the timing of migration from Mexico
  46. Cognitive Regime Shift II - When/why/how the Brain Breaks/(Optional) SFI Community Lecture at the Lensic Performing Arts Center by Melanie Mitchell: Artificial Intelligence: A Guide for Thinking Humans
  47. Cognitive Regime Shift II - When/why/how the Brain Breaks/Cocktail
  48. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 1 Continental Breakfast
  49. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 1 Lunch
  50. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 1 Shuttle Departing Hotel Santa Fe (at lobby) to SFI
  51. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 1 Shuttle Departing SFI to Hotel Santa Fe
  52. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 1 wiki platform work time
  53. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 2 Continental Breakfast
  54. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 2 Lunch
  55. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 2 Shuttle Departing SFI to Hotel Santa Fe
  56. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 2 wiki platform work time
  57. Cognitive Regime Shift II - When/why/how the Brain Breaks/Group dinner
  58. Cognitive Regime Shift II - When/why/how the Brain Breaks/MyPage
  59. Cognitive Regime Shift II - When/why/how the Brain Breaks/Recap from Day 1
  60. Cognitive Regime Shift II - When/why/how the Brain Breaks/Round Table Discussion 1: The nature of compensation and cognitive reserves
  61. Cognitive Regime Shift II - When/why/how the Brain Breaks/Round Table Discussion 2: The multiple scales of damage – from cells to networks
  62. Cognitive Regime Shift II - When/why/how the Brain Breaks/Round Table Discussion 3: Models for transforming circuits (neural) into tasks (psychology)
  63. Cognitive Regime Shift I - When the Brain Breaks/Day 1 Group Dinner at La Boca
  64. Cognitive Regime Shift I - When the Brain Breaks/Day 1 Lunch (outside SFI Collins Conference Room)
  65. Cognitive Regime Shift I - When the Brain Breaks/Day 1 PM Break
  66. Cognitive Regime Shift I - When the Brain Breaks/Day 2 Continental Breakfast (outside SFI Collins Conference Room)
  67. Cognitive Regime Shift I - When the Brain Breaks/Day 2 Dinner: self-organize
  68. Cognitive Regime Shift I - When the Brain Breaks/Day 2 Lunch (outside SFI Collins Conference Room)
  69. Cognitive Regime Shift I - When the Brain Breaks/Day 2 PM Break
  70. Cognitive Regime Shift I - When the Brain Breaks/Day 3 Continental Breakfast (outside SFI Collins Conference Room)
  71. Cognitive Regime Shift I - When the Brain Breaks/Day 3 Lunch (outside SFI Collins Conference Room); Adjourn
  72. Cognitive Regime Shift I - When the Brain Breaks/Open discussion, synthesis, planning for Day 3, platform time
  73. Cognitive Regime Shift I - When the Brain Breaks/Recap from Day 1
  74. Cognitive Regime Shift I - When the Brain Breaks/Research Jam
  75. Cognitive neuroscience of sleep
  76. Community of the Self
  77. Comparing the Morningness-Eveningness Questionnaire and Munich ChronoType Questionnaire to the dim light melatonin onset
  78. Complexity of neural computation and cognition
  79. Control of Mammalian Circadian Rhythm by CKI -Regulated Proteasome-Mediated PER2 Degradation
  80. Coordinated reset
  81. Coordinated reset vibrotactile stimulation shows prolonged improvement in Parkinson's disease
  82. Correlation between interaction strengths drives stability in large ecological networks
  83. Critical networks exhibit maximal information diversity in structure-dynamics relationships
  84. Critical slowing down as early warning for the onset and termination of depression
  85. Critical slowing down as early warning for the onset and termination of depression2
  86. Critical slowing down as early warning for the onset and termination of depression3
  87. Critical slowing down as early warning for the onset and termination of depression4
  88. Data analysis using regression and multilevel/hierarchical models
  89. Decreased segregation of brain systems across the healthy adult lifespan
  90. Demography of dietary restriction and death in Drosophila
  91. Differential and enhanced response to climate forcing in diarrheal disease due to rotavirus across a megacity of the developing world
  92. Diversity, Stability, and Reproducibility in Stochastically Assembled Microbial Ecosystems
  93. Diversity of ageing across the tree of life
  94. Doi.org/10.1073/pnas.1810630115
  95. Domestic and International Climate Migration from Rural Mexico
  96. Dynamic Multi-System Resilience in Human Aging/Day 1 AM Break
  97. Dynamic Multi-System Resilience in Human Aging/Day 1 Continental Breakfast (outside SFI Noyce Conference Room)
  98. Dynamic Multi-System Resilience in Human Aging/Day 1 Lunch (outside SFI Noyce Conference Room)
  99. Dynamic Multi-System Resilience in Human Aging/Day 1 Open group discussion
  100. Dynamic Multi-System Resilience in Human Aging/Day 1 PM Break
  101. Dynamic Multi-System Resilience in Human Aging/Day 1 Shuttle Departing Hotel Santa Fe (at lobby) to SFI
  102. Dynamic Multi-System Resilience in Human Aging/Day 1 Shuttle Departing SFI to Hotel Santa Fe
  103. Dynamic Multi-System Resilience in Human Aging/Day 2 AM Break
  104. Dynamic Multi-System Resilience in Human Aging/Day 2 Collaborative Platform Work Time
  105. Dynamic Multi-System Resilience in Human Aging/Day 2 Continental Breakfast (outside SFI Noyce Conference Room)
  106. Dynamic Multi-System Resilience in Human Aging/Day 2 Lunch (outside SFI Noyce Conference Room)
  107. Dynamic Multi-System Resilience in Human Aging/Day 2 Opening Remarks
  108. Dynamic Multi-System Resilience in Human Aging/Day 2 PM Break
  109. Dynamic Multi-System Resilience in Human Aging/Day 2 Shuttle Departing Hotel Santa Fe (at lobby)
  110. Dynamic Multi-System Resilience in Human Aging/Day 2 Shuttle Departing SFI to Hotel Santa Fe
  111. Dynamic Multi-System Resilience in Human Aging/Group dinner at Casa Chimayo
  112. Dynamic Multi-System Resilience in Human Aging/MyPage
  113. Dynamical Resilience Indicators in Time Series of Self-Rated Health Correspond to Frailty Levels in Older Adults
  114. Dynamical indicators of resilience in postural balance time series are related to successful aging in high-functioning older adults
  115. Early-warning signals for critical transitions
  116. Eco-Evolutionary Theory and Insect Outbreaks
  117. Ecosystem tipping points in an evolving world
  118. Editorial overview: Neurobiology of cognitive behavior: Complexity of neural computation and cognition
  119. Effects of host heterogeneity on pathogen diversity and evolution
  120. Elevated success of multispecies bacterial invasions impacts community composition during ecological succession
  121. Emancipatory catastrophism: What does it mean to climate change and risk society?
  122. Emergence of complex dynamics in a simple model of signaling networks
  123. Emergent simplicity in microbial community assembly
  124. Entrainment of the human circadian clock to the natural light-dark cycle
  125. Environmental Dimensions of Migration
  126. Evidence of strain structure in Plasmodium falciparum var gene repertoires in children from Gabon, West Africa
  127. Evolution and climate variability
  128. Experience-dependent phase-reversal of hippocampal neuron firing during REM sleep
  129. Exposure to room light before bedtime suppresses melatonin onset and shortens melatonin duration in humans
  130. Extended Twilight among Isogenic C. elegans Causes a Disproportionate Scaling between Lifespan and Health
  131. Fisher's geometrical model and the mutational patterns of antibiotic resistance across dose gradients
  132. Fisher's geometrical model emerges as a property of complex integrated phenotypic networks
  133. Five Years of Experimental Warming Increases the Biodiversity and Productivity of Phytoplankton
  134. Fractal dynamics in physiology: Alterations with disease and aging
  135. Frequency-dependent selection in vaccine-associated pneumococcal population dynamics
  136. Genetics of the human circadian clock and sleep homeostat
  137. Hallmarks of Biological Failure/Adjourn; Shuttle Departing SFI to Hotel Santa Fe
  138. Hallmarks of Biological Failure/Breakout Group Discussion I
  139. Hallmarks of Biological Failure/Breakout Group Discussion II
  140. Hallmarks of Biological Failure/Day 1 AM Break
  141. Hallmarks of Biological Failure/Day 1 Continental Breakfast (outside SFI Noyce Conference Room)
  142. Hallmarks of Biological Failure/Day 1 Lunch (outside SFI Noyce Conference Room)
  143. Hallmarks of Biological Failure/Day 1 Open Discussion
  144. Hallmarks of Biological Failure/Day 1 PM Break
  145. Hallmarks of Biological Failure/Day 1 Shuttle Departing Hotel Santa Fe (at lobby) to SFI
  146. Hallmarks of Biological Failure/Day 1 Shuttle Departing SFI to Hotel Santa Fe
  147. Hallmarks of Biological Failure/Day 1 Wiki Platform Work Time
  148. Hallmarks of Biological Failure/Day 2 AM Break
  149. Hallmarks of Biological Failure/Day 2 Continental Breakfast (outside SFI Noyce Conference Room)
  150. Hallmarks of Biological Failure/Day 2 Lunch (outside SFI Noyce Conference Room)
  151. Hallmarks of Biological Failure/Day 2 PM Break
  152. Hallmarks of Biological Failure/Day 2 Shuttle Departing Hotel Santa Fe (at lobby) to SFI
  153. Hallmarks of Biological Failure/Day 2 Shuttle Departing SFI to Hotel Santa Fe
  154. Hallmarks of Biological Failure/Day 2 Wiki Platform Work Time
  155. Hallmarks of Biological Failure/Day 3 AM Break
  156. Hallmarks of Biological Failure/Day 3 Continental Breakfast (outside SFI Noyce Conference Room)
  157. Hallmarks of Biological Failure/Day 3 Lunch (outside SFI Noyce Conference Room); Adjourn
  158. Hallmarks of Biological Failure/Day 3 Shuttle Departing Hotel Santa Fe (at lobby) to SFI
  159. Hallmarks of Biological Failure/Day 3 Wiki Platform Work Time
  160. Hallmarks of Biological Failure/Group Discussion & Breakout Group Discussion
  161. Hallmarks of Biological Failure/Group Presentations and Plans for Next Steps
  162. Hallmarks of Biological Failure/Group dinner at Casa Chimayo
  163. Hallmarks of Biological Failure/Introduction: 3-min Lightning Talks
  164. Hallmarks of Biological Failure/MyPage
  165. Hallmarks of Biological Failure Breakout Group Discussion
  166. Health beliefs and the politics of Cree well-being
  167. Heuristic segmentation of a nonstationary time series
  168. Hierarchy theory: the challenge of complex systems
  169. Hierarchy theory: the challenge of complex systems2
  170. High performance communication by people with paralysis using an intracortical brain-computer interface
  171. High sensitivity and interindividual variability in the response of the human circadian system to evening light
  172. Homer1a drives homeostatic scaling-down of excitatory synapses during sleep
  173. How the World Survived the Population Bomb: Lessons From 50 Years of Extraordinary Demographic History
  174. Human cortical excitability increases with time awake
  175. In Vivo Amelioration of Age-Associated Hallmarks by Partial Reprogramming Cellular reprogramming by transient expression of Yamanaka factors ameliorates age-associated symptoms, prolongs lifespan in progeroid mice, and improves tissue homeostasis in older
  176. In defence of repugnance
  177. Increased Network Interdependency Leads to Aging
  178. Indirect genetic effects clarify how traits can evolve even when fitness does not
  179. Inferring network structure from cascades
  180. Input source and strength influences overall firing phase of model hippocampal CA1 pyramidal cells during theta: Relevance to REM sleep reactivation and memory consolidation
  181. Interdependence theory of tissue failure: Bulk and boundary effects
  182. Intergenerational resource transfers with random offspring numbers
  183. International Climate Migration: Evidence for the Climate Inhibitor Mechanism and the Agricultural Pathway
  184. Intrinsic period and light intensity determine the phase relationship between melatonin and sleep in humans
  185. Irregular spiking of pyramidal neurons organizes as scale-invariant neuronal avalanches in the awake state
  186. Irreversible Processes in Ecological Evolution/Collaborative Platform Work Time: references, reference note, presentation upload, additional reflection & commenting on each other’s reflection
  187. Irreversible Processes in Ecological Evolution/Day 1 Continental Breakfast (outside SFI Noyce Conference Room)
  188. Irreversible Processes in Ecological Evolution/Day 1 Lunch (outside SFI Noyce Conference Room)
  189. Irreversible Processes in Ecological Evolution/Day 1 PM Break
  190. Irreversible Processes in Ecological Evolution/Day 2 AM Break
  191. Irreversible Processes in Ecological Evolution/Day 2 Continental Breakfast (outside SFI Noyce Conference Room)
  192. Irreversible Processes in Ecological Evolution/Day 2 Lunch (outside SFI Noyce Conference Room)
  193. Irreversible Processes in Ecological Evolution/Day 2 Open discussion
  194. Irreversible Processes in Ecological Evolution/Day 2 PM Break
  195. Irreversible Processes in Ecological Evolution/Day 2 Reflection time
  196. Irreversible Processes in Ecological Evolution/Day 3 AM Break
  197. Irreversible Processes in Ecological Evolution/Day 3 Continental Breakfast (outside SFI Noyce Conference Room)
  198. Irreversible Processes in Ecological Evolution/Day 3 Lunch (outside SFI Noyce Conference Room); Adjourn
  199. Irreversible Processes in Ecological Evolution/Day 3 Open discussion
  200. Irreversible Processes in Ecological Evolution/Day 3 Reflection time
  201. Irreversible Processes in Ecological Evolution/MyPage
  202. Irreversible Processes in Ecological Evolution/Open discussion & reflection time I
  203. Irreversible Processes in Ecological Evolution/Open discussion & reflection time II
  204. Irreversible Processes in Ecological Evolution/Open discussion & reflection time III
  205. K-complex, a reactive EEG graphoelement of NREM sleep: An old chap in a new garment
  206. Limits of Prediction in thermodynamic systems: a review
  207. Longevity Among Hunter- Gatherers: A Cross-Cultural Examination
  208. Loss of Consciousness Is Associated with Stabilization of Cortical Activity
  209. Loss of Consciousness Is Associated with Stabilization of Cortical Activity2
  210. Lotka-Volterra pairwise modeling fails to capture diverse pairwise microbial interactions
  211. Macroscopic Models for Human Circadian Rhythms
  212. Magnetoencephalography
  213. Main Page
  214. Mammalian sleep dynamics: How diverse features arise from a common physiological framework
  215. Markov mortality models: Implications of quasistationarity and varying initial distributions
  216. Mathematical model of the human circadian system with two interacting oscillators.
  217. Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics
  218. Metabolic traits predict the effects of warming on phytoplankton
  219. Metabolic traits predict the effects of warming on phytoplankton competition
  220. Microbial interactions lead to rapid micro-scale successions on model marine particles
  221. Modeling life expectancy and surplus production of dynamic pre-contact territories in leeward Kohala, Hawai'i
  222. Modeling transformations of neurodevelopmental sequences across mammalian species
  223. Mortality experience of Tsimane Amerindians of Bolivia: Regional variation and temporal trends
  224. Multi-day rhythms modulate seizure risk in epilepsy
  225. Multilevel Analysis
  226. Multitrait successional forest dynamics enable diverse competitive coexistence
  227. Networks of genetic similarity reveal non-neutral processes shape strain structure in Plasmodium falciparum
  228. Neutral theory for life histories
  229. Niche partitioning due to adaptive foraging reverses effects of nestedness and connectance on pollination network stability
  230. On Nonstable and Stable Population Momentum
  231. On mixed-effect Cox models, sparse matrices, and modeling data from large pedigrees
  232. On the decline of biodiversity due to area loss
  233. Open questions in artificial life
  234. Paradoxical timing of the circadian rhythm of sleep propensity serves to consolidate sleep and wakefulness in humans
  235. Pawar systematic variation
  236. Peak of circadian melatonin rhythm occurs later within the sleep of older subjects
  237. Physical Resilience: Not Simply the Opposite of Frailty
  238. Physical resilience in older adults: Systematic review and development of an emerging construct
  239. PhysioBank, PhysioToolkit, and PhysioNet : Components of a New Research Resource for Complex Physiologic Signals
  240. Population and prehistory I: Food-dependent population growth in constant environments
  241. Population and prehistory II: Space-limited human populations in constant environments.
  242. Population and prehistory III: Food-dependent demography in variable environments
  243. Population and the Environment: Analytical Demography and Applied Population Ethics/Day 1 AM Break 1
  244. Population and the Environment: Analytical Demography and Applied Population Ethics/Day 1 AM Break 2
  245. Population and the Environment: Analytical Demography and Applied Population Ethics/Day 1 Continental Breakfast (outside SFI Noyce Conference Room)
  246. Population and the Environment: Analytical Demography and Applied Population Ethics/Day 1 Lunch (outside SFI Noyce Conference Room)
  247. Population and the Environment: Analytical Demography and Applied Population Ethics/Day 1 PM Break 1
  248. Population and the Environment: Analytical Demography and Applied Population Ethics/Day 1 PM Break 2
  249. Population and the Environment: Analytical Demography and Applied Population Ethics/Day 2 AM Break 1
  250. Population and the Environment: Analytical Demography and Applied Population Ethics/Day 2 AM Break 2

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