Santa Fe Institute Collaboration Platform

Thermodynamics of Computation

Pages with the most revisions

From Thermodynamics of Computation

Showing below up to 250 results in range #1 to #250.

View (previous 250 | next 250) (20 | 50 | 100 | 250 | 500)

  1. Karpur Shukla‏‎ (47 revisions)
  2. Michael Frank‏‎ (26 revisions)
  3. Thermodynamics of Computation:Reference group/Allowed values‏‎ (17 revisions)
  4. Entropy production along a stochastic trajectory and an integral fluctuation theorem‏‎ (14 revisions)
  5. Sadasivan Shankar‏‎ (14 revisions)
  6. Entropy production fluctuation theorem and the nonequilibrium work relation for free energy differences‏‎ (12 revisions)
  7. Logical Reversibility of Computation‏‎ (12 revisions)
  8. Stochastic thermodynamics, fluctuation theorems and molecular machines‏‎ (11 revisions)
  9. Fluctuation theorems for stochastic dynamics‏‎ (11 revisions)
  10. Equilibrium free-energy differences from nonequilibrium measurements: A master-equation approach‏‎ (10 revisions)
  11. Main Page‏‎ (9 revisions)
  12. A Gallavotti Cohen-Type Symmetry in the Large Deviation Functional for Stochastic Dynamics‏‎ (9 revisions)
  13. Quantum fluctuation relations: foundations and applications‏‎ (8 revisions)
  14. Work and heat probability distributions in out-of-equilibrium systems‏‎ (8 revisions)
  15. Steady state thermodynamics‏‎ (8 revisions)
  16. Petrosyan A 2010 Fluctuations in out-of-equilibrium systems: from theory to experiment J. Stat‏‎ (8 revisions)
  17. Nonequilibrium equality for free energy differences‏‎ (8 revisions)
  18. Irreversibility and Heat Generation in the Computing Process‏‎ (8 revisions)
  19. Thermodynamics (Hoboken‏‎ (7 revisions)
  20. The thermodynamics of computation-a review‏‎ (7 revisions)
  21. Nonequilibrium generation of information in copolymerization processes.‏‎ (7 revisions)
  22. Second law and Landauer principle far from equilibrium‏‎ (7 revisions)
  23. Equilibrium microstates which generate second law violating steady states‏‎ (6 revisions)
  24. Handbook of stochastic methods for physics, chemistry and the natural sciences‏‎ (6 revisions)
  25. The mesoscopic dynamics of thermodynamic systems‏‎ (6 revisions)
  26. Langevin Equation and Thermodynamics‏‎ (6 revisions)
  27. Non-equilibrium work relations‏‎ (6 revisions)
  28. Probability of second law violations in shearing steady states‏‎ (6 revisions)
  29. The Nonequilibrium Thermodynamics of Small Systems‏‎ (6 revisions)
  30. Quantum entropy production as a measure of irreversibility‏‎ (6 revisions)
  31. On the Origin and the Use of Fluctuation Relations for the Entropy‏‎ (6 revisions)
  32. Erratum: Nonequilibrium fluctuations, fluctuation theorems, and counting statistics in quantum systems‏‎ (6 revisions)
  33. Dynamical ensembles in nonequilibrium statistical mechanics‏‎ (6 revisions)
  34. Open-system nonequilibrium steady state: Statistical thermodynamics, fluctuations, and chemical oscillations‏‎ (6 revisions)
  35. General theory of thermal fluctuations in nonlinear systems‏‎ (6 revisions)
  36. Fluctuation Theorems‏‎ (6 revisions)
  37. Mesoscopic nonequilibrium thermodynamics of single macromolecules and dynamic entropy-energy compensation‏‎ (6 revisions)
  38. Reviews of nonlinear dynamics and complexity Nonequilibrium Statistical Physics of Small Systems: Fluctuation Relations and Beyond (Weinheim: Wiley-VCH)‏‎ (6 revisions)
  39. Irreversibility and the second law of thermodynamics at the nanoscale‏‎ (6 revisions)
  40. Free energy reconstruction from nonequilibrium single-molecule pulling experiments.‏‎ (6 revisions)
  41. Path-ensemble averages in systems driven far from equilibrium‏‎ (6 revisions)
  42. Is it possible to experimentally verify the fluctuation relation? A review of theoretical motivations and numerical evidence‏‎ (6 revisions)
  43. Path integrals with generalized Grassmann variables‏‎ (6 revisions)
  44. Steady-state thermodynamics of Langevin systems‏‎ (6 revisions)
  45. Thermodynamics 3rd enlarged edn‏‎ (6 revisions)
  46. Mechanics of Nonequilibrium Liquids 2nd edn‏‎ (6 revisions)
  47. Non-equilibrium statistical mechanics: From a paradigmatic model to biological transport‏‎ (6 revisions)
  48. Nonlinear fluctuation-dissipation relations and stochastic models in nonequilibrium thermodynamics. II. Kinetic potential and variational principles for nonlinear irreversible processes‏‎ (6 revisions)
  49. Theory for non-equilibrium statistical mechanics.‏‎ (6 revisions)
  50. Fluctuation theorem for stochastic dynamics‏‎ (6 revisions)
  51. Kinetic Characterization of Heat Bath and the Energetics of Thermal Ratchet Models‏‎ (6 revisions)
  52. Brownian motion: A paradigm of soft matter and biological physics‏‎ (6 revisions)
  53. The Fluctuation Theorem‏‎ (6 revisions)
  54. Elements of Information Theory‏‎ (6 revisions)
  55. Equalities and Inequalities: Irreversibility and the Second Law of Thermodynamics at the Nanoscale‏‎ (6 revisions)
  56. Stochastic thermodynamics of nonequilibrium steady states in chemical reaction systems‏‎ (5 revisions)
  57. Theory of Nonequilibrium Steady States‏‎ (5 revisions)
  58. Thermodynamics of information‏‎ (5 revisions)
  59. Generalized detailed fluctuation theorem under nonequilibrium feedback control‏‎ (5 revisions)
  60. Kinetic Proofreading: A New Mechanism for Reducing Errors in Biosynthetic Processes Requiring High Specificity‏‎ (5 revisions)
  61. Test page‏‎ (5 revisions)
  62. Vijay Balasubramanian‏‎ (5 revisions)
  63. Experimental demonstration of information-to-energy conversion and validation of the generalized Jarzynski equality‏‎ (5 revisions)
  64. A DNA-fuelled molecular machine made of DNA‏‎ (5 revisions)
  65. Generalization of the second law for a transition between nonequilibrium states‏‎ (5 revisions)
  66. Kinetic versus energetic discrimination in biological copying‏‎ (5 revisions)
  67. Special Issue titled "The Fuzziness in Molecular, Supramolecular, and Systems Chemistry" of the journal Molecules (MDPI, IF=3.098)‏‎ (5 revisions)
  68. Thermodynamics of natural selection II: Chemical Carnot cycles‏‎ (4 revisions)
  69. Thermodynamics of natural selection I: Energy flow and the limits on organization‏‎ (4 revisions)
  70. The large deviation approach to statistical mechanics‏‎ (4 revisions)
  71. Energy as a constraint on the coding and processing of sensory information‏‎ (4 revisions)
  72. Renaud Jolivet‏‎ (4 revisions)
  73. Information-theoretic approach to the study of control systems‏‎ (4 revisions)
  74. Generalization of the second law for a nonequilibrium initial state‏‎ (4 revisions)
  75. A cost/speed/reliability tradeoff to erasing‏‎ (4 revisions)
  76. Hong Qian‏‎ (4 revisions)
  77. Fluctuation theorem for nonequilibrium reactions‏‎ (4 revisions)
  78. Experimental verification of Landauer's principle linking information and thermodynamics‏‎ (4 revisions)
  79. The energy-speed-accuracy trade-off in sensory adaptation‏‎ (4 revisions)
  80. The metabolic cost of neural information‏‎ (4 revisions)
  81. Metabolically efficient information processing.‏‎ (4 revisions)
  82. Finite-time erasing of information stored in fermionic bits‏‎ (4 revisions)
  83. Use of mutual information to decrease entropy: Implications for the second law of thermodynamics‏‎ (4 revisions)
  84. Experimental observation of the role of mutual information in the nonequilibrium dynamics of a Maxwell demon‏‎ (4 revisions)
  85. Elements of Information Theory 2nd Edition‏‎ (4 revisions)
  86. Thermodynamics of a physical model implementing a Maxwell demon‏‎ (4 revisions)
  87. High-precision test of Landauer's principle in a feedback trap‏‎ (4 revisions)
  88. Minimal energy cost for thermodynamic information processing: Measurement and information erasure‏‎ (4 revisions)
  89. Thermodynamics with continuous information flow‏‎ (4 revisions)
  90. Fluctuation theorem with information exchange: Role of correlations in stochastic thermodynamics‏‎ (4 revisions)
  91. Universal features in the energetics of symmetry breaking‏‎ (4 revisions)
  92. The physics of forgetting: Landauer's erasure principle and information theory‏‎ (4 revisions)
  93. Engineering aspects of enzymatic signal transduction: Photoreceptors in the retina‏‎ (4 revisions)
  94. Thermodynamics of prediction‏‎ (4 revisions)
  95. Stochastic thermodynamics under coarse graining‏‎ (4 revisions)
  96. Conservative logic‏‎ (4 revisions)
  97. DNA as a universal substrate for chemical kinetics (Extended Abstract)‏‎ (4 revisions)
  98. Laser cooling of atoms‏‎ (3 revisions)
  99. Reprint of: Digital and spatial knowledge management in urban governance: Emerging issues in India, Brazil, South Africa, and Peru‏‎ (3 revisions)
  100. Stochastic thermodynamics Selforganization by Nonlinear Irreversible Processes‏‎ (3 revisions)
  101. Computational Complexity: A Modern Approach‏‎ (3 revisions)
  102. Notes on the history of reversible computation‏‎ (3 revisions)
  103. Modeling Maxwell's demon with a microcanonical Szilard engine‏‎ (3 revisions)
  104. A Relaxed Min-Sum LDPC Decoder With Simplified Check Nodes‏‎ (3 revisions)
  105. Triggered amplification by hybridization chain reaction‏‎ (3 revisions)
  106. Thermodynamics and an Introduction to Thermostatistics, 2nd ed.‏‎ (3 revisions)
  107. Polynomial time algorithms for discrete logarithms and factoring on a quantum computer‏‎ (3 revisions)
  108. Andy Adamatzky‏‎ (3 revisions)
  109. Massimiliano Esposito‏‎ (3 revisions)
  110. Work and information processing in a solvable model of Maxwell's demon‏‎ (3 revisions)
  111. James Crutchfield‏‎ (3 revisions)
  112. Chris Kempes‏‎ (3 revisions)
  113. Peter Stadler‏‎ (3 revisions)
  114. William Bialek‏‎ (3 revisions)
  115. Shamit Shrivastava‏‎ (3 revisions)
  116. Naftali Tishby‏‎ (3 revisions)
  117. Nonequilibrium thermodynamics and nonlinear kinetics in a cellular signaling switch‏‎ (3 revisions)
  118. Pieter Rein ten Wolde‏‎ (3 revisions)
  119. Udo Seifert‏‎ (3 revisions)
  120. Terry Sejnowski‏‎ (3 revisions)
  121. Computation with finite stochastic chemical reaction networks‏‎ (3 revisions)
  122. A Note on Bennett’s Time-Space Tradeoff for Reversible Computation‏‎ (3 revisions)
  123. Information and flux in a feedback controlled Brownian ratchet‏‎ (3 revisions)
  124. Time and space bounds for reversible simulation‏‎ (3 revisions)
  125. Design of 1-tape 2-symbol reversible Turing machines based on reversible logic elements‏‎ (3 revisions)
  126. Thermodynamics of feedback controlled systems‏‎ (3 revisions)
  127. Three faces of the second law. I. Master equation formulation‏‎ (3 revisions)
  128. Memory erasure in small systems‏‎ (3 revisions)
  129. One-dimensional shift of a brownian particle under the feedback control‏‎ (3 revisions)
  130. Stochastic thermodynamics for Maxwell demon feedbacks‏‎ (3 revisions)
  131. Entropy production for mechanically or chemically driven biomolecules‏‎ (3 revisions)
  132. Designing optimal discrete-feedback thermodynamic engines‏‎ (3 revisions)
  133. Programmable ligand-controlled riboregulators of eukaryotic gene expression‏‎ (3 revisions)
  134. Energy transduction of isothermal ratchets: Generic aspects and specific examples close to and far from equilibrium‏‎ (3 revisions)
  135. John Rundle‏‎ (3 revisions)
  136. Feedback control in a collective flashing ratchet‏‎ (3 revisions)
  137. Entropy Production of Brownian Macromolecules with Inertia‏‎ (3 revisions)
  138. Energy limitation as a selective pressure on the evolution of sensory systems‏‎ (3 revisions)
  139. Fluctuation theorems for quantum processes‏‎ (3 revisions)
  140. Cognitive Computing - Merging Concepts with Hardware‏‎ (3 revisions)
  141. Spontaneous evolution of modularity and network motifs‏‎ (3 revisions)
  142. Modular verification of chemical reaction network encodings via serializability analysis‏‎ (3 revisions)
  143. Holevo's bound from a general quantum fluctuation theorem‏‎ (3 revisions)
  144. Generalized Jarzynski equality under nonequilibrium feedback control‏‎ (3 revisions)
  145. Extracting work from a single heat bath through feedback‏‎ (3 revisions)
  146. Maxwell's demon in biochemical signal transduction with feedback loop‏‎ (3 revisions)
  147. Stochastic thermodynamics of bipartite systems: Transfer entropy inequalities and a Maxwell's demon interpretation‏‎ (3 revisions)
  148. Efficiency of cellular information processing‏‎ (3 revisions)
  149. Thermodynamic Costs of Information Processing in Sensory Adaptation‏‎ (3 revisions)
  150. Postdoc in stochastic thermodynamics of molecular machines‏‎ (3 revisions)
  151. A rigorous derivation of the chemical master equation‏‎ (3 revisions)
  152. Nonequilibrium detailed fluctuation theorem for repeated discrete feedback‏‎ (3 revisions)
  153. Jarzynski equality modified in the linear feedback system‏‎ (3 revisions)
  154. Brownian motors: Noisy transport far from equilibrium‏‎ (3 revisions)
  155. Nonequilibrium fluctuations in small systems: from physics to biology‏‎ (2 revisions)
  156. Stochastic thermodynamics: principles and perspectives‏‎ (2 revisions)
  157. Notes on Landauer's principle, reversible computation, and Maxwell's Demon‏‎ (2 revisions)
  158. The energy expansions of evolution‏‎ (2 revisions)
  159. Heat generation required by information erasure‏‎ (2 revisions)
  160. The free energy requirements of biological organisms; implications for evolution‏‎ (2 revisions)
  161. The Use of Information Theory in Evolutionary Biology‏‎ (2 revisions)
  162. Evidence for early life in Earth's oldest hydrothermal vent precipitates‏‎ (2 revisions)
  163. Ilya Nemenman‏‎ (2 revisions)
  164. Gavin Crooks‏‎ (2 revisions)
  165. Christopher Jarzynski‏‎ (2 revisions)
  166. David Sivak‏‎ (2 revisions)
  167. How much non-coding DNA do eukaryotes require?‏‎ (2 revisions)
  168. Limits of sensing temporal concentration changes by single cells‏‎ (2 revisions)
  169. Takahiro Sagawa‏‎ (2 revisions)
  170. Wojciech H. Zurek‏‎ (2 revisions)
  171. Early metazoan life: divergence, environment and ecology‏‎ (2 revisions)
  172. Stochasticity of gene products from transcriptional pulsing‏‎ (2 revisions)
  173. Analog Computation by DNA Strand Displacement Circuits‏‎ (2 revisions)
  174. Programmable chemical reaction networks: emulating regulatory functions in living cells using a bottom-up approach‏‎ (2 revisions)
  175. Erik Winfree‏‎ (2 revisions)
  176. The Energy Use Associated with Neural Computation in the Cerebellum‏‎ (2 revisions)
  177. Shifts in metabolic scaling, production, and efficiency across major evolutionary transitions of life‏‎ (2 revisions)
  178. Energy balance for analysis of complex metabolic networks.‏‎ (2 revisions)
  179. An information theoretical analysis of kinase activated phosphorylation dephosphorylation cycle‏‎ (2 revisions)
  180. How Far is Complex Balancing from Detailed Balancing?‏‎ (2 revisions)
  181. Janet Anders‏‎ (2 revisions)
  182. Nihat Ay‏‎ (2 revisions)
  183. Correlated morphometric and biochemical studies on the liver cell. I. Morphometric model, stereologic methods, and normal morphometric data for rat liver.‏‎ (2 revisions)
  184. Aviv Bergman‏‎ (2 revisions)
  185. Carl T. Bergstrom‏‎ (2 revisions)
  186. Benjamin Machta‏‎ (2 revisions)
  187. Life under extreme energy limitation: A synthesis of laboratory- and field-based investigations‏‎ (2 revisions)
  188. A general model for the structure and allometry of plant vascular systems‏‎ (2 revisions)
  189. An estimate of the total DNA in the biosphere‏‎ (2 revisions)
  190. John C. Doyle‏‎ (2 revisions)
  191. Cooperativity, sensitivity, and noise in biochemical signaling‏‎ (2 revisions)
  192. Chemical implementation of finite-state machines‏‎ (2 revisions)
  193. A quantitative comparison of sRNA-based and protein-based gene regulation‏‎ (2 revisions)
  194. Synergism between different germinant receptors in the germination of Bacillus subtilis spores‏‎ (2 revisions)
  195. On the decrease of entropy in a thermodynamic system by the intervention of intelligent beings‏‎ (2 revisions)
  196. Necessary and sufficient conditions for complex balancing in chemical kinetics‏‎ (2 revisions)
  197. Physics of chemoreception‏‎ (2 revisions)
  198. System wide analyses have underestimated protein abundances and the importance of transcription in mammals‏‎ (2 revisions)
  199. Probing the Limits to Positional Information‏‎ (2 revisions)
  200. Specificity in Two-Component Signal Transduction Pathways‏‎ (2 revisions)
  201. The energetics of genome complexity‏‎ (2 revisions)
  202. Kinetics and thermodynamics of amyloid formation from direct measurements of fluctuations in fibril mass‏‎ (2 revisions)
  203. The thermodynamic meaning of negative entropy‏‎ (2 revisions)
  204. Energy dissipation in an adaptive molecular circuit‏‎ (2 revisions)
  205. Thermodynamics of natural selection III: Landauer's principle in computation and chemistry‏‎ (2 revisions)
  206. Minimal energy requirements in communication‏‎ (2 revisions)
  207. Self-organization and entropy reduction in a living cell‏‎ (2 revisions)
  208. Maximum likelihood and the single receptor‏‎ (2 revisions)
  209. Transitions from Nonliving to Living Matter‏‎ (2 revisions)
  210. Two approaches for metabolic pathway analysis?‏‎ (2 revisions)
  211. A general model for ontogenetic growth‏‎ (2 revisions)
  212. Structure and stability of certain chemical networks and applications to the kinetic proofreading model of T-cell receptor signal transduction‏‎ (2 revisions)
  213. Dissipation-error tradeoff in proofreading‏‎ (2 revisions)
  214. Drivers of bacterial maintenance and minimal energy requirements‏‎ (2 revisions)
  215. The physical nature of information‏‎ (2 revisions)
  216. A master equation description of local fluctuations‏‎ (2 revisions)
  217. Glucans monomer-exchange dynamics as an open chemical network‏‎ (2 revisions)
  218. Physical limits on cellular sensing of spatial gradients.‏‎ (2 revisions)
  219. Workshop report:Modeling the molecularmechanism of bacterial spore germination and elucidating reasons for germination heterogeneity‏‎ (2 revisions)
  220. A "fast growth" method of computing free energy differences‏‎ (2 revisions)
  221. Quantum techniques for studying equilibrium in reaction networks‏‎ (2 revisions)
  222. Accuracy of direct gradient sensing by cell-surface receptors‏‎ (2 revisions)
  223. On r- and K-Selection‏‎ (2 revisions)
  224. Optimal resource allocation in cellular sensing systems‏‎ (2 revisions)
  225. The berg-purcell limit revisited‏‎ (2 revisions)
  226. A quantitative estimation of the global translational activity in logarithmically growing yeast cells‏‎ (2 revisions)
  227. The minimal work cost of information processing‏‎ (2 revisions)
  228. Information thermodynamics of near-equilibrium computation‏‎ (2 revisions)
  229. Genome sizes and the benford distribution‏‎ (2 revisions)
  230. Regulation of cell size in the yeast Saccharomyces cerevisiae.‏‎ (2 revisions)
  231. Energy flows in low-entropy complex systems‏‎ (2 revisions)
  232. An informational process based on reversible universal cellular automata‏‎ (2 revisions)
  233. Nonequilibrium Measurements of Free Energy Differences for Microscopically Reversible Markovian Systems‏‎ (2 revisions)
  234. Modulation of Chemical Composition and Other Parameters of the Cell by Growth Rate‏‎ (2 revisions)
  235. Entropy involved in fidelity of DNA replication‏‎ (2 revisions)
  236. An analytical solution to the kinetics of breakable filament assembly‏‎ (2 revisions)
  237. Fluctuating currents in stochastic thermodynamics. II. Energy conversion and nonequilibrium response in kinesin models‏‎ (2 revisions)
  238. Self-regulating gene: An exact solution‏‎ (2 revisions)
  239. The bioenergetic costs of a gene‏‎ (2 revisions)
  240. Eukaryotic organisms in Proterozoic oceans‏‎ (2 revisions)
  241. Stoichiometric network theory for nonequilibrium biochemical systems‏‎ (2 revisions)
  242. Open Markov Processes and Open Reaction Networks‏‎ (2 revisions)
  243. Ultimate physical limits to computation‏‎ (2 revisions)
  244. Stability and Complex Balancing in Mass-Action Systems with Three Short Complexes‏‎ (2 revisions)
  245. The relationship between stochastic and deterministic models for chemical reactions‏‎ (2 revisions)
  246. Thermodynamic cost of computation, algorithmic complexity and the information metric‏‎ (2 revisions)
  247. Invertible cellular automata: A review‏‎ (2 revisions)
  248. On the shoulders of giants: Properties of the stellar halo and the milky way mass distribution‏‎ (2 revisions)
  249. Stochastic theory of nonequilibrium steady states. Part II: Applications in chemical biophysics‏‎ (2 revisions)
  250. Generalizing Landauer's principle‏‎ (2 revisions)

View (previous 250 | next 250) (20 | 50 | 100 | 250 | 500)