Santa Fe Institute Collaboration Platform

COMPLEX TIME: Adaptation, Aging, & Arrow of Time

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Contact: Caitlin Lorraine McShea, Program Manager, cmcshea@santafe.edu

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  1. A Stab at Time/Questions/discussion about representing time; script discussion
  2. A Stab at Time/Script writing
  3. A Tissue Engineered Model of Aging: Interdependence and Cooperative Effects in Failing Tissues
  4. A communal catalogue reveals Earth's multiscale microbial diversity
  5. A model comparison approach shows stronger support for economic models of fertility decline
  6. A quantitative model for the effects of light on the amplitude and phase of the deep circadian pacemaker based on human data
  7. A robust measure of food web intervality
  8. A theory of age-dependent mutation and senescence
  9. A truer measure of our ignorance
  10. A two process model of sleep regulation
  11. Abnormal Locus Coeruleus Sleep Activity Alters Sleep Signatures of Memory Consolidation and Impairs Place Cell Stability and Spatial Memory
  12. Addition of a non-photic component to a light-based mathematical model of the human circadian pacemaker
  13. Age-structured and stage-structured population dynamics
  14. Ageing-associated disorders
  15. Ageing and the circadian and homeostatic regulation of human sleep during forced desynchrony of rest, melatonin and temperature rhythms
  16. Aging, Rejuvenation, and Epigenetic Reprogramming: Resetting the Aging Clock
  17. Aging, mortality, and the fast growth trade-off of Schizosaccharomyces pombe
  18. Aging and Adaptation in Infectious Diseases/Breakout Group Discussions
  19. Aging and Adaptation in Infectious Diseases/Continental/Breakfast
  20. Aging and Adaptation in Infectious Diseases/Day 1 Continental Breakfast (outside SFI Noyce Conference Room)
  21. Aging and Adaptation in Infectious Diseases/Day 1 Group Dinner at La Choza
  22. Aging and Adaptation in Infectious Diseases/Day 1 Lunch (outside SFI Noyce Conference Room)
  23. Aging and Adaptation in Infectious Diseases/Day 1 PM Break
  24. Aging and Adaptation in Infectious Diseases/Day 2 Continental Breakfast (outside SFI Noyce Conference Room)
  25. Aging and Adaptation in Infectious Diseases/Day 2 Group Dinner at Restaurant Martin
  26. Aging and Adaptation in Infectious Diseases/Day 2 Lunch (outside SFI Noyce Conference Room)
  27. Aging and Adaptation in Infectious Diseases/Day 2 PM Break
  28. Aging and Adaptation in Infectious Diseases/Day 3 Continental Breakfast (outside SFI Noyce Conference Room)
  29. Aging and Adaptation in Infectious Diseases/Day 3 Lunch (outside SFI Noyce Conference Room); Adjourn
  30. Aging and Adaptation in Infectious Diseases/Discussion, development of themes, and organization of breakout groups
  31. Aging and Adaptation in Infectious Diseases/Group Presentations and Plans for Next Steps
  32. Aging and Adaptation in Infectious Diseases II/Day 1: Discussion, development of themes, and structure of breakout groups
  33. Aging and Adaptation in Infectious Diseases II/Day 1 Continental Breakfast (outside SFI Noyce Conference Room)
  34. Aging and Adaptation in Infectious Diseases II/Day 1 Lunch (outside SFI Noyce Conference Room)
  35. Aging and Adaptation in Infectious Diseases II/Day 1 PM Break
  36. Aging and Adaptation in Infectious Diseases II/Day 2 Continental Breakfast (outside SFI Noyce Conference Room)
  37. Aging and Adaptation in Infectious Diseases II/Day 2 Lunch (outside SFI Noyce Conference Room)
  38. Aging and Adaptation in Infectious Diseases II/Day 2 PM Break
  39. Aging and Adaptation in Infectious Diseases II/Day 2 Working Group Breakout Session I
  40. Aging and Adaptation in Infectious Diseases II/Day 2 Working Group Breakout Session II
  41. Aging and Adaptation in Infectious Diseases II/Day 3 Continental Breakfast (outside SFI Noyce Conference Room)
  42. Aging and Adaptation in Infectious Diseases II/Day 3 Lunch (outside SFI Noyce Conference Room)
  43. Aging and Adaptation in Infectious Diseases II/Day 3 PM Break
  44. Aging and Adaptation in Infectious Diseases II/Day 3 Working Group Breakout Session I
  45. Aging and Adaptation in Infectious Diseases II/Day 3 Working Group Breakout Session II
  46. Aging and Adaptation in Infectious Diseases II/Day 4 Continental Breakfast (outside Collins Conference Room)
  47. Aging and Adaptation in Infectious Diseases II/Day 4 Lunch (outside Collins Conference Room)
  48. Aging and Adaptation in Infectious Diseases II/Day 4 PM Break
  49. Aging and Adaptation in Infectious Diseases II/Day 4 Working Group Breakout Session I
  50. Aging and Adaptation in Infectious Diseases II/Day 4 Working Group Breakout Session II
  51. Aging and Adaptation in Infectious Diseases II/Discussion of plans for wrapping up and final session breakout group presentations
  52. Aging and Adaptation in Infectious Diseases II/Group Dinner at Radish & Rye
  53. Aging and Adaptation in Infectious Diseases II/MyPage
  54. Aging and Adaptation in Infectious Diseases II/Session V: Aging and the Arrow of Time –Breakout Group Updates and Broader Themes of the SFI/JSMF Initiative
  55. Aging and Adaptation in Infectious Diseases II/Summary of Day 1: Each speaker from Day 1 gives a 5 minute, two slides summary (intended to bring late arrivals up to date)
  56. Aging and Adaptation in Infectious Diseases III/Breakout Group Presentations
  57. Aging and Adaptation in Infectious Diseases III/Closing and next steps
  58. Aging and Adaptation in Infectious Diseases III/Day 1 Continental Breakfast (outside SFI Noyce Conference Room)
  59. Aging and Adaptation in Infectious Diseases III/Day 1 Discussion, development of themes, and structure of breakout groups for the rest of the week
  60. Aging and Adaptation in Infectious Diseases III/Day 1 Lunch (outside SFI Noyce Conference Room)
  61. Aging and Adaptation in Infectious Diseases III/Day 1 PM Break
  62. Aging and Adaptation in Infectious Diseases III/Day 2 Continental Breakfast (outside SFI Noyce Conference Room)
  63. Aging and Adaptation in Infectious Diseases III/Day 2 Group Discussion and Working Group Planning Sessions
  64. Aging and Adaptation in Infectious Diseases III/Day 2 Lunch (outside SFI Noyce Conference Room)
  65. Aging and Adaptation in Infectious Diseases III/Day 2 Working Group Breakout Sessions
  66. Aging and Adaptation in Infectious Diseases III/Day 3 Continental Breakfast (outside SFI Noyce Conference Room)
  67. Aging and Adaptation in Infectious Diseases III/Day 3 Lunch (outside SFI Noyce Conference Room)
  68. Aging and Adaptation in Infectious Diseases III/Day 3 PM Break
  69. Aging and Adaptation in Infectious Diseases III/Day 3 Working Group Breakout Sessions I
  70. Aging and Adaptation in Infectious Diseases III/Day 3 Working Group Breakout Sessions II
  71. Aging and Adaptation in Infectious Diseases III/Day 3 Working Group Breakout Sessions III
  72. Aging and Adaptation in Infectious Diseases III/Day 4 Continental Breakfast (outside Noyce Conference Room)
  73. Aging and Adaptation in Infectious Diseases III/Day 4 Lunch (outside SFI Noyce Conference Room)
  74. Aging and Adaptation in Infectious Diseases III/Discussion: Plans for an SFI publication / Presentation from SFI Press
  75. Aging and Adaptation in Infectious Diseases III/Group Dinner
  76. Aging and Adaptation in Infectious Diseases III/KatieGostic
  77. Aging and Adaptation in Infectious Diseases III/Optional additional Working Group Sessions (for those staying that afternoon)
  78. Aging and Adaptation in Infectious Diseases III/Re-assembling: Brief updates and plans for Day 3
  79. Aging and Adaptation in Infectious Diseases III/Session I: Immune System: Innate/Adaptive collaboration
  80. Aging and Adaptation in Infectious Diseases III/Session II: Diversity, adaptive immunity, and age
  81. Aging and Adaptation in Infectious Diseases III/Session III: Disease History, Aging, and Complex Time
  82. Aging and Adaptation in Infectious Diseases III/Welcome, Introductions and Workshop Overview
  83. Aging and measures of processing speed
  84. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/A time to sleep and a time to die
  85. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/About time: Precision measurements and emergent simplicities in an individual bacterial cell's stochastic aging dynamics.
  86. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/All creatures fast and slow: senescence and longevity across the tree of life
  87. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Bree Aldridge
  88. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Day 1 Continental Breakfast (outside SFI Collins Conference Room)
  89. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Discussion
  90. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/JacopoGrilli
  91. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/LinChao
  92. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/MartinPicard
  93. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/MatteoOsella
  94. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/More questions than answers: relations between quantittative physiology and aging in E. coli
  95. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Overview of the meeting
  96. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Owen Jones
  97. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/SabrinaSpencer
  98. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/SrividyaIyer-Biswas
  99. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Stochastic processes shape senescence, beyond genes, and environment
  100. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Stochasticity, immortality, and mortality in E. coli
  101. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Systematic Physiology and Aging Across Diverse Organisms
  102. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/The long and the short of it: mycobacterial aging, asymmetry, and stress tolerance
  103. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Time perception and the rate of cellular aging outside the human body: an energetic perspective
  104. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/Toward a Molecular Understanding of Quiescence versus Senescence
  105. Aging in Single-celled Organisms: from Bacteria to the Whole Tree of Life/UliSteiner
  106. Aging in complex interdependency networks
  107. Amplification or suppression: Social networks and the climate change-migration association in rural Mexico
  108. An exploration of the temporal dynamics
  109. An opposite role for tau in circadian rhythms revealed by mathematical modeling
  110. Antidepressant suppression of non-REM sleep spindles and REM sleep impairs hippocampus-dependent learning while augmenting striatum-dependent learning
  111. Are There too Many Farms in the World? Labor-Market Transaction Costs, Machine Capacities and Optimal Farm Size
  112. Are individual differences in sleep and circadian timing amplified by use of artificial light sources?
  113. Asking the Right Questions in Alzheimer’s Research
  114. Available energy fluxes drive a transition in the diversity, stability, and functional structure of microbial communities
  115. Brain computer interface
  116. CD4 memory T cell levels predict life span in genetically heterogeneous mice.
  117. Chesapeake requiem
  118. Cholinergic modulation of cognitive processing: Insights drawn from computational models
  119. Choosing Prediction Over Explanation in Psychology: Lessons From Machine Learning
  120. Circadian pacemaker interferes with sleep onset at specific times each day: Role in insomnia
  121. Circadian phenotype impacts the brain's resting-state functional connectivity, attentional performance, and sleepiness
  122. Circadian regulation dominates homeostatic control of sleep length and prior wake length in humans
  123. Circadian temperature and melatonin rhythms, sleep, and neurobehavioral function in humans living on a 20-h day
  124. Climate shocks and rural-urban migration in Mexico: exploring nonlinearities and thresholds
  125. Climate shocks and the timing of migration from Mexico
  126. Cognitive Regime Shift II - When/why/how the Brain Breaks/(Optional) SFI Community Lecture at the Lensic Performing Arts Center by Melanie Mitchell: Artificial Intelligence: A Guide for Thinking Humans
  127. Cognitive Regime Shift II - When/why/how the Brain Breaks/Cocktail
  128. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 1 Continental Breakfast
  129. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 1 Lunch
  130. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 1 Shuttle Departing Hotel Santa Fe (at lobby) to SFI
  131. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 1 Shuttle Departing SFI to Hotel Santa Fe
  132. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 1 wiki platform work time
  133. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 2 Continental Breakfast
  134. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 2 Lunch
  135. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 2 Shuttle Departing SFI to Hotel Santa Fe
  136. Cognitive Regime Shift II - When/why/how the Brain Breaks/Day 2 wiki platform work time
  137. Cognitive Regime Shift II - When/why/how the Brain Breaks/Group dinner
  138. Cognitive Regime Shift II - When/why/how the Brain Breaks/MyPage
  139. Cognitive Regime Shift II - When/why/how the Brain Breaks/Recap from Day 1
  140. Cognitive Regime Shift II - When/why/how the Brain Breaks/Round Table Discussion 1: The nature of compensation and cognitive reserves
  141. Cognitive Regime Shift II - When/why/how the Brain Breaks/Round Table Discussion 2: The multiple scales of damage – from cells to networks
  142. Cognitive Regime Shift II - When/why/how the Brain Breaks/Round Table Discussion 3: Models for transforming circuits (neural) into tasks (psychology)
  143. Cognitive Regime Shift I - When the Brain Breaks/Day 1 Group Dinner at La Boca
  144. Cognitive Regime Shift I - When the Brain Breaks/Day 1 Lunch (outside SFI Collins Conference Room)
  145. Cognitive Regime Shift I - When the Brain Breaks/Day 1 PM Break
  146. Cognitive Regime Shift I - When the Brain Breaks/Day 2 Continental Breakfast (outside SFI Collins Conference Room)
  147. Cognitive Regime Shift I - When the Brain Breaks/Day 2 Dinner: self-organize
  148. Cognitive Regime Shift I - When the Brain Breaks/Day 2 Lunch (outside SFI Collins Conference Room)
  149. Cognitive Regime Shift I - When the Brain Breaks/Day 2 PM Break
  150. Cognitive Regime Shift I - When the Brain Breaks/Day 3 Continental Breakfast (outside SFI Collins Conference Room)
  151. Cognitive Regime Shift I - When the Brain Breaks/Day 3 Lunch (outside SFI Collins Conference Room); Adjourn
  152. Cognitive Regime Shift I - When the Brain Breaks/Open discussion, synthesis, planning for Day 3, platform time
  153. Cognitive Regime Shift I - When the Brain Breaks/Recap from Day 1
  154. Cognitive Regime Shift I - When the Brain Breaks/Research Jam
  155. Cognitive neuroscience of sleep
  156. Community of the Self
  157. Comparing the Morningness-Eveningness Questionnaire and Munich ChronoType Questionnaire to the dim light melatonin onset
  158. Complexity of neural computation and cognition
  159. Control of Mammalian Circadian Rhythm by CKI -Regulated Proteasome-Mediated PER2 Degradation
  160. Coordinated reset
  161. Coordinated reset vibrotactile stimulation shows prolonged improvement in Parkinson's disease
  162. Correlation between interaction strengths drives stability in large ecological networks
  163. Critical networks exhibit maximal information diversity in structure-dynamics relationships
  164. Critical slowing down as early warning for the onset and termination of depression
  165. Critical slowing down as early warning for the onset and termination of depression2
  166. Critical slowing down as early warning for the onset and termination of depression3
  167. Critical slowing down as early warning for the onset and termination of depression4
  168. Data analysis using regression and multilevel/hierarchical models
  169. Decreased segregation of brain systems across the healthy adult lifespan
  170. Demography of dietary restriction and death in Drosophila
  171. Differential and enhanced response to climate forcing in diarrheal disease due to rotavirus across a megacity of the developing world
  172. Diversity, Stability, and Reproducibility in Stochastically Assembled Microbial Ecosystems
  173. Diversity of ageing across the tree of life
  174. Doi.org/10.1073/pnas.1810630115
  175. Domestic and International Climate Migration from Rural Mexico
  176. Dynamic Multi-System Resilience in Human Aging/Day 1 AM Break
  177. Dynamic Multi-System Resilience in Human Aging/Day 1 Continental Breakfast (outside SFI Noyce Conference Room)
  178. Dynamic Multi-System Resilience in Human Aging/Day 1 Lunch (outside SFI Noyce Conference Room)
  179. Dynamic Multi-System Resilience in Human Aging/Day 1 Open group discussion
  180. Dynamic Multi-System Resilience in Human Aging/Day 1 PM Break
  181. Dynamic Multi-System Resilience in Human Aging/Day 1 Shuttle Departing Hotel Santa Fe (at lobby) to SFI
  182. Dynamic Multi-System Resilience in Human Aging/Day 1 Shuttle Departing SFI to Hotel Santa Fe
  183. Dynamic Multi-System Resilience in Human Aging/Day 2 AM Break
  184. Dynamic Multi-System Resilience in Human Aging/Day 2 Collaborative Platform Work Time
  185. Dynamic Multi-System Resilience in Human Aging/Day 2 Continental Breakfast (outside SFI Noyce Conference Room)
  186. Dynamic Multi-System Resilience in Human Aging/Day 2 Lunch (outside SFI Noyce Conference Room)
  187. Dynamic Multi-System Resilience in Human Aging/Day 2 Opening Remarks
  188. Dynamic Multi-System Resilience in Human Aging/Day 2 PM Break
  189. Dynamic Multi-System Resilience in Human Aging/Day 2 Shuttle Departing Hotel Santa Fe (at lobby)
  190. Dynamic Multi-System Resilience in Human Aging/Day 2 Shuttle Departing SFI to Hotel Santa Fe
  191. Dynamic Multi-System Resilience in Human Aging/Group dinner at Casa Chimayo
  192. Dynamic Multi-System Resilience in Human Aging/MyPage
  193. Dynamical Resilience Indicators in Time Series of Self-Rated Health Correspond to Frailty Levels in Older Adults
  194. Dynamical indicators of resilience in postural balance time series are related to successful aging in high-functioning older adults
  195. Early-warning signals for critical transitions
  196. Eco-Evolutionary Theory and Insect Outbreaks
  197. Ecosystem tipping points in an evolving world
  198. Editorial overview: Neurobiology of cognitive behavior: Complexity of neural computation and cognition
  199. Effects of host heterogeneity on pathogen diversity and evolution
  200. Elevated success of multispecies bacterial invasions impacts community composition during ecological succession
  201. Emancipatory catastrophism: What does it mean to climate change and risk society?
  202. Emergence of complex dynamics in a simple model of signaling networks
  203. Emergent simplicity in microbial community assembly
  204. Entrainment of the human circadian clock to the natural light-dark cycle
  205. Environmental Dimensions of Migration
  206. Evidence of strain structure in Plasmodium falciparum var gene repertoires in children from Gabon, West Africa
  207. Evolution and climate variability
  208. Experience-dependent phase-reversal of hippocampal neuron firing during REM sleep
  209. Exposure to room light before bedtime suppresses melatonin onset and shortens melatonin duration in humans
  210. Extended Twilight among Isogenic C. elegans Causes a Disproportionate Scaling between Lifespan and Health
  211. Fisher's geometrical model and the mutational patterns of antibiotic resistance across dose gradients
  212. Fisher's geometrical model emerges as a property of complex integrated phenotypic networks
  213. Five Years of Experimental Warming Increases the Biodiversity and Productivity of Phytoplankton
  214. Fractal dynamics in physiology: Alterations with disease and aging
  215. Frequency-dependent selection in vaccine-associated pneumococcal population dynamics
  216. Genetics of the human circadian clock and sleep homeostat
  217. Hallmarks of Biological Failure/Adjourn; Shuttle Departing SFI to Hotel Santa Fe
  218. Hallmarks of Biological Failure/Breakout Group Discussion I
  219. Hallmarks of Biological Failure/Breakout Group Discussion II
  220. Hallmarks of Biological Failure/Day 1 AM Break
  221. Hallmarks of Biological Failure/Day 1 Continental Breakfast (outside SFI Noyce Conference Room)
  222. Hallmarks of Biological Failure/Day 1 Lunch (outside SFI Noyce Conference Room)
  223. Hallmarks of Biological Failure/Day 1 Open Discussion
  224. Hallmarks of Biological Failure/Day 1 PM Break
  225. Hallmarks of Biological Failure/Day 1 Shuttle Departing Hotel Santa Fe (at lobby) to SFI
  226. Hallmarks of Biological Failure/Day 1 Shuttle Departing SFI to Hotel Santa Fe
  227. Hallmarks of Biological Failure/Day 1 Wiki Platform Work Time
  228. Hallmarks of Biological Failure/Day 2 AM Break
  229. Hallmarks of Biological Failure/Day 2 Continental Breakfast (outside SFI Noyce Conference Room)
  230. Hallmarks of Biological Failure/Day 2 Lunch (outside SFI Noyce Conference Room)
  231. Hallmarks of Biological Failure/Day 2 PM Break
  232. Hallmarks of Biological Failure/Day 2 Shuttle Departing Hotel Santa Fe (at lobby) to SFI
  233. Hallmarks of Biological Failure/Day 2 Shuttle Departing SFI to Hotel Santa Fe
  234. Hallmarks of Biological Failure/Day 2 Wiki Platform Work Time
  235. Hallmarks of Biological Failure/Day 3 AM Break
  236. Hallmarks of Biological Failure/Day 3 Continental Breakfast (outside SFI Noyce Conference Room)
  237. Hallmarks of Biological Failure/Day 3 Lunch (outside SFI Noyce Conference Room); Adjourn
  238. Hallmarks of Biological Failure/Day 3 Shuttle Departing Hotel Santa Fe (at lobby) to SFI
  239. Hallmarks of Biological Failure/Day 3 Wiki Platform Work Time
  240. Hallmarks of Biological Failure/Group Discussion & Breakout Group Discussion
  241. Hallmarks of Biological Failure/Group Presentations and Plans for Next Steps
  242. Hallmarks of Biological Failure/Group dinner at Casa Chimayo
  243. Hallmarks of Biological Failure/Introduction: 3-min Lightning Talks
  244. Hallmarks of Biological Failure/MyPage
  245. Hallmarks of Biological Failure Breakout Group Discussion
  246. Health beliefs and the politics of Cree well-being
  247. Heuristic segmentation of a nonstationary time series
  248. Hierarchy theory: the challenge of complex systems
  249. Hierarchy theory: the challenge of complex systems2
  250. High performance communication by people with paralysis using an intracortical brain-computer interface

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