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COMPLEX TIME: Adaptation, Aging, & Arrow of Time

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Contact: Caitlin Lorraine McShea, Program Manager, cmcshea@santafe.edu
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The Diagnosis of Delirium Superimposed on Dementia: An Emerging Challenge +
Journal of the American Medical Directors Association  +
L
Life-Span, tumor incidence, and natural killer cell activity in mice selected for high or low antibody responsiveness +
Journal of the National Cancer Institute  +
S
Social embeddedness in an online weight management programme is linked to greater weight loss +
Journal of the Royal Society Interface  +
T
The organization and control of an evolving interdependent population +
Journal of the Royal Society Interface  +
D
Dynamical Resilience Indicators in Time Series of Self-Rated Health Correspond to Frailty Levels in Older Adults +
Journals of Gerontology - Series A Biological Sciences and Medical Sciences  +
P
Physical resilience in older adults: Systematic review and development of an emerging construct +
Journals of Gerontology - Series A Biological Sciences and Medical Sciences  +
R
REM restriction persistently alters strategy used to solve a spatial task +
Learning and Memory  +
T
The McKendrick partial differential equation and its uses in epidemiology and population study +
Mathematical and Computer Modelling  +
S
Stimulus-response paradigm for characterizing the loss of resilience in homeostatic regulation associated with frailty +
Mechanisms of Ageing and Development  +
Stimulus-response paradigm for characterizing the loss of resilience in homeostatic regulation associated with frailty2 +
Mechanisms of Ageing and Development  +
Stimulus-response paradigm for characterizing the loss of resilience in homeostatic regulation associated with frailty3 +
Mechanisms of Ageing and Development  +
G
Genetic control of immune responsiveness, aging and tumor incidence +
Mechanisms of Ageing and Development  +
T
The epidemiologic transition: A theory of the epidemiology of population change +
Milbank Quarterly  +
I
In defence of repugnance +
Mind  +
A
A Period2 Phosphoswitch Regulates and Temperature Compensates Circadian Period +
Molecular Cell  +
T
The heritability of general cognitive ability increases linearly from childhood to young adulthood +
Molecular Psychiatry  +
C
Control of Mammalian Circadian Rhythm by CKI -Regulated Proteasome-Mediated PER2 Degradation +
Molecular and Cellular Biology  +
Coordinated reset vibrotactile stimulation shows prolonged improvement in Parkinson's disease +
Movement Disorders  +
R
Recurrent dynamics in pre-frontal cortex +
Nature  +
P
Predicting biodiversity change and averting collapse in agricultural landscapes +
Nature  +
T
The community of the self +
Nature  +
The community of the self2 +
Nature  +
The community of the self3 +
Nature  +
S
Structure, function and diversity of the healthy human microbiome +
Nature  +
A
A communal catalogue reveals Earth's multiscale microbial diversity +
Nature  +
Ageing-associated disorders +
Nature  +
N
Natural speech reveals the semantic maps that tile human cerebral cortex +
Nature  +
E
Early-warning signals for critical transitions +
Nature  +
T
The function of dream sleep +
Nature  +
D
Diversity of ageing across the tree of life +
Nature  +
P
Predicting the stability of large structured food webs +
Nature Communications  +
N
Networks of genetic similarity reveal non-neutral processes shape strain structure in Plasmodium falciparum +
Nature Communications  +
O
On the decline of biodiversity due to area loss +
Nature Communications  +
M
Microbial interactions lead to rapid micro-scale successions on model marine particles +
Nature Communications  +
S
Species traits and network structure predict the success and impacts of pollinator invasions +
Nature Communications  +
M
Multi-day rhythms modulate seizure risk in epilepsy +
Nature Communications  +
P
Parvalbumin-expressing interneurons coordinate hippocampal network dynamics required for memory consolidation +
Nature Communications  +
F
Frequency-dependent selection in vaccine-associated pneumococcal population dynamics +
Nature Ecology and Evolution  +
E
Ecosystem tipping points in an evolving world +
Nature Ecology and Evolution  +
T
The resilience framework as a strategy to combat stress-related disorders2 +
Nature Human Behaviour  +
The resilience framework as a strategy to combat stress-related disorders3 +
Nature Human Behaviour  +
U
Unstable neurons underlie a stable learned behavior +
Nature Neuroscience  +
R
REM sleep selectively prunes and maintains new synapses in development and learning +
Nature Neuroscience  +
C
Communication dynamics in complex brain networks +
Nature Reviews Neuroscience  +
M
Maintenance, reserve and compensation: the cognitive neuroscience of healthy ageing +
Nature Reviews Neuroscience  +
P
Precision Functional Mapping of Individual Human Brains +
Neuron  +
S
Symmetry Breaking in Space-Time Hierarchies Shapes Brain Dynamics and Behavior +
Neuron  +
F
Functional Brain Networks Are Dominated by Stable Group and Individual Factors, Not Cognitive or Daily Variation +
Neuron  +
P
Paradoxical timing of the circadian rhythm of sleep propensity serves to consolidate sleep and wakefulness in humans +
Neuroscience Letters  +
T
The Island Where People Forget to Die - The New York Times +
New York Times Magazine  +
A
Adaptive foraging allows the maintenance of biodiversity of pollination networks +
Oikos  +
F
Five Years of Experimental Warming Increases the Biodiversity and Productivity of Phytoplankton +
PLoS Biology  +
S
Species interactions alter evolutionary responses to a novel environment +
PLoS Biology  +
C
Coherence potentials: Loss-less, all-or-none network events in the cortex +
PLoS Biology  +
A
Aging, mortality, and the fast growth trade-off of Schizosaccharomyces pombe +
PLoS Biology  +
Available energy fluxes drive a transition in the diversity, stability, and functional structure of microbial communities +
PLoS Computational Biology  +
U
Universally sloppy parameter sensitivities in systems biology models +
PLoS Computational Biology  +
M
Mammalian sleep dynamics: How diverse features arise from a common physiological framework +
PLoS Computational Biology  +
P
Predicting maximum tree heights and other traits from allometric scaling and resource limitations +
PLoS ONE  +
T
The application of statistical physics to evolutionary biology +
PNAS  +
S
Status competition, inequality, and fertility: Implications for the demographic transition +
Philosophical Transactions of the Royal Society B: Biological Sciences  +
T
The future of human cerebral cartography: A novel approach +
Philosophical Transactions of the Royal Society B: Biological Sciences  +
P
Population axiology +
Philosophy Compass  +
I
Inferring network structure from cascades +
Physical Review E  +
A
Aging in complex interdependency networks +
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics  +
I
Increased Network Interdependency Leads to Aging +
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics  +
H
Heuristic segmentation of a nonstationary time series +
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics  +
C
Critical networks exhibit maximal information diversity in structure-dynamics relationships +
Physical Review Letters  +
D
Diversity, Stability, and Reproducibility in Stochastically Assembled Microbial Ecosystems +
Physical Review Letters  +
P
Population momentum across the demographic transition +
Population and Development Review  +
S
Socially Embedded Preferences, Environmental Externalities, and Reproductive Rights +
Population and Development Review  +
C
Climate shocks and the timing of migration from Mexico +
Population and Environment  +
T
The Causal Relationship between Fertility and Infant Mortality: Prospective analyses of a population in transition +
Population in the Human Sciences: Concepts, Models, Evidence  +
I
International Climate Migration: Evidence for the Climate Inhibitor Mechanism and the Agricultural Pathway +
Population, Space and Place  +
N
Network measures predict neuropsychological outcome after brain injury +
Proceedings of the National Academy of Sciences of the United States of America  +
H
High sensitivity and interindividual variability in the response of the human circadian system to evening light +
Proceedings of the National Academy of Sciences of the United States of America  +
A
An opposite role for tau in circadian rhythms revealed by mathematical modeling +
Proceedings of the National Academy of Sciences of the United States of America  +
C
Cortically coordinated NREM thalamocortical oscillations play an essential, instructive role in visual system plasticity +
Proceedings of the National Academy of Sciences of the United States of America  +
M
Multitrait successional forest dynamics enable diverse competitive coexistence +
Proceedings of the National Academy of Sciences  +
S
Single pollinator species losses reduce floral fidelity and plant reproductive function +
Proceedings of the National Academy of Sciences  +
T
The transition between the niche and neutral regimes in ecology +
Proceedings of the National Academy of Sciences  +
S
Systematic variation in the temperature dependence of physiological and ecological traits +
Proceedings of the National Academy of Sciences  +
Shifts in metabolic scaling, production, and efficiency across major evolutionary transitions of life +
Proceedings of the National Academy of Sciences  +
D
Differential and enhanced response to climate forcing in diarrheal disease due to rotavirus across a megacity of the developing world +
Proceedings of the National Academy of Sciences  +
S
Socioeconomic status moderates age-related differences in the brain’s functional network organization and anatomy across the adult lifespan2 +
Proceedings of the National Academy of Sciences  +
D
Decreased segregation of brain systems across the healthy adult lifespan +
Proceedings of the National Academy of Sciences  +
S
Social network- and community-level influences on contraceptive use: Evidence from rural poland +
Proceedings of the Royal Society B: Biological Sciences  +
C
Cognitive neuroscience of sleep +
Progress in Brain Research  +
A
A Neural Network Model of Retrieval-Induced Forgetting +
Psychological Review  +
L
Limits of Prediction in thermodynamic systems: a review +
Reports on Progress in Physics  +
Q
Quantitative, dynamic models to integrate environment, population, and society +
Roots of Conflict: Soils, Agriculture, and Sociopolitical Complexity in Ancient Hawai'i (School for Advanced Research Advanced Seminar Series)  +
I
Interdependence theory of tissue failure: Bulk and boundary effects +
Royal Society Open Science  +
S
Social status alters immune regulation and response to infection in macaques +
Science  +
E
Evolution and climate variability +
Science  +
Emergent simplicity in microbial community assembly +
Science  +
T
Transient phenomena in ecology +
Science  +
D
Demography of dietary restriction and death in Drosophila +
Science  +
H
Homer1a drives homeostatic scaling-down of excitatory synapses during sleep +
Science  +
R
REM sleep–active MCH neurons are involved in forgetting hippocampus-dependent memories +
Science  +
REM sleep–active MCH neurons are involved in forgetting hippocampus-dependent memories2 +
Science  +
W
Waning immunity. +
Science (New York, N.Y.)  +
A
A Tissue Engineered Model of Aging: Interdependence and Cooperative Effects in Failing Tissues +
Scientific Reports  +
D
Decline of long-range temporal correlations in the human brain during sustained wakefulness +
Scientific Reports  +
W
What can Invasion Analyses Tell us about Evolution under Stochasticity in Finite Populations ? +
Selection  +
C
Circadian phenotype impacts the brain's resting-state functional connectivity, attentional performance, and sleepiness +
Sleep  +
Circadian regulation dominates homeostatic control of sleep length and prior wake length in humans +
Sleep  +
K
K-complex, a reactive EEG graphoelement of NREM sleep: An old chap in a new garment +
Sleep Medicine Reviews  +
E
Eco-Evolutionary Theory and Insect Outbreaks +
The American Naturalist  +
M
Mathematical model of the human circadian system with two interacting oscillators. +
The American journal of physiology  +
P
Population and prehistory I: Food-dependent population growth in constant environments +
Theoretical Population Biology  +
Population and prehistory II: Space-limited human populations in constant environments. +
Theoretical Population Biology  +
Population and prehistory III: Food-dependent demography in variable environments +
Theoretical Population Biology  +
M
Markov mortality models: Implications of quasistationarity and varying initial distributions +
Theoretical Population Biology  +
A
Altered avalanche dynamics in a developmental NMDAR hypofunction model of cognitive impairment +
Translational Psychiatry  +
R
Review - Segregated Systems of Human Brain Networks +
Trends in Cognitive Sciences  +
P
Process-Specific Alliances (PSAs) in Cognitive Neuroscience +
Trends in Cognitive Sciences  +
H
Human information processing in complex networks +
arXiv  +
P
Prediction of post-vaccine population structure of Streptococcus pneumoniae using accessory gene frequencies +
bioRxiv  +
T
The Hidden Repertoire of Brain Dynamics and Dysfunction +
bioRxiv  +
B
Brain state stability during working memory is explained by network control theory, modulated by dopamine D1/D2 receptor function, and diminished in schizophrenia +
bioRxiv  +
S
Searching for rewards like a child means less generalization and more directed exploration +
bioRxiv  +
C
Chesapeake requiem +
chesapeake requiem  +
L
Lotka-Volterra pairwise modeling fails to capture diverse pairwise microbial interactions +
eLife  +
S
Shearing in flow environment promotes evolution of social behavior in microbial populations +
eLife  +
I
Irregular spiking of pyramidal neurons organizes as scale-invariant neuronal avalanches in the awake state +
eLife  +
B
Brain computer interface +
eLife  +
H
High performance communication by people with paralysis using an intracortical brain-computer interface +
eLife  +
C
Critical dynamics of gene networks is a mechanism behind ageing and Gompertz law +
q-bio.MN  +
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